Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.29□□□□□ -1.56
RAE1P78406 AC027243.2-201ENST00000602530 724 ntBASIC5.29□□□□□ -1.56
RAE1P78406 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.29□□□□□ -1.56
RAE1P78406 AC010632.3-201ENST00000611377 369 ntBASIC5.29□□□□□ -1.56
RAE1P78406 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 AC231759.1-201ENST00000616455 597 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AP003485.2-201ENST00000623636 610 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.29□□□□□ -1.56
RAE1P78406 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RAE1P78406 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RAE1P78406 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RAE1P78406 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 AC106872.5-201ENST00000508856 1416 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.29□□□□□ -1.56
RAE1P78406 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RAE1P78406 ZNF733P-202ENST00000444809 1573 ntBASIC5.29□□□□□ -1.56
RAE1P78406 AC091305.2-201ENST00000624049 1576 ntBASIC5.29□□□□□ -1.56
RAE1P78406 ADAM24P-201ENST00000398655 2101 ntBASIC5.29□□□□□ -1.56
RAE1P78406 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAE1P78406 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.28□□□□□ -1.56
RAE1P78406 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 AC144833.1-201ENST00000567953 4089 ntBASIC5.28□□□□□ -1.56
RAE1P78406 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RAE1P78406 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RAE1P78406 AC119751.3-201ENST00000399720 670 ntBASIC5.28□□□□□ -1.56
RAE1P78406 RPL7P58-201ENST00000402913 758 ntBASIC5.28□□□□□ -1.56
RAE1P78406 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 RNU4-22P-201ENST00000411058 166 ntBASIC5.28□□□□□ -1.56
RAE1P78406 AL662874.1-201ENST00000426065 230 ntBASIC5.28□□□□□ -1.56
RAE1P78406 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 AC005297.1-201ENST00000444765 862 ntBASIC5.28□□□□□ -1.56
RAE1P78406 IGBP1P3-201ENST00000447449 1000 ntBASIC5.28□□□□□ -1.56
RAE1P78406 AC004022.1-201ENST00000447766 1066 ntBASIC5.28□□□□□ -1.56
RAE1P78406 OR51B8P-201ENST00000449892 769 ntBASIC5.28□□□□□ -1.56
RAE1P78406 PTGES3P5-201ENST00000455109 434 ntBASIC5.28□□□□□ -1.56
RAE1P78406 NAP1L1P3-201ENST00000462291 880 ntBASIC5.28□□□□□ -1.56
RAE1P78406 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 AC008837.1-201ENST00000511513 412 ntBASIC5.28□□□□□ -1.56
RAE1P78406 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 SNORA43.3-201ENST00000517240 103 ntBASIC5.28□□□□□ -1.56
RAE1P78406 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 AC109635.6-201ENST00000525487 1113 ntBASIC5.28□□□□□ -1.56
RAE1P78406 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
RAE1P78406 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 NDUFA5P11-201ENST00000567995 343 ntBASIC5.28□□□□□ -1.56
RAE1P78406 MTND3P13-201ENST00000574391 343 ntBASIC5.28□□□□□ -1.56
RAE1P78406 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 H3F3BP2-201ENST00000583907 357 ntBASIC5.28□□□□□ -1.56
RAE1P78406 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 BNIP3P24-201ENST00000593398 557 ntBASIC5.28□□□□□ -1.56
RAE1P78406 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.28□□□□□ -1.56
RAE1P78406 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 AC090897.3-201ENST00000636973 1157 ntBASIC5.28□□□□□ -1.56
RAE1P78406 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 AL133268.1-201ENST00000405676 1401 ntBASIC5.28□□□□□ -1.56
RAE1P78406 VN2R3P-201ENST00000422626 1412 ntBASIC5.28□□□□□ -1.56
RAE1P78406 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
RAE1P78406 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.28□□□□□ -1.56
RAE1P78406 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RAE1P78406 ZNF402P-201ENST00000404435 3100 ntBASIC5.28□□□□□ -1.56
RAE1P78406 OR13C1P-202ENST00000641378 2919 ntBASIC5.27□□□□□ -1.57
RAE1P78406 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms