Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ACTBP60709 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 ATP5F1P2-201ENST00000398143 760 ntBASIC4.39□□□□□ -1.71
ACTBP60709 RPL5P19-201ENST00000404228 893 ntBASIC4.39□□□□□ -1.71
ACTBP60709 RNA5SP178-201ENST00000410380 128 ntBASIC4.39□□□□□ -1.71
ACTBP60709 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.39□□□□□ -1.71
ACTBP60709 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.39□□□□□ -1.71
ACTBP60709 SRSF1P1-201ENST00000424058 520 ntBASIC4.39□□□□□ -1.71
ACTBP60709 MTCO1P51-201ENST00000427672 1060 ntBASIC4.39□□□□□ -1.71
ACTBP60709 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.39□□□□□ -1.71
ACTBP60709 AL353597.2-202ENST00000434901 373 ntBASIC4.39□□□□□ -1.71
ACTBP60709 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.39□□□□□ -1.71
ACTBP60709 AC019185.1-201ENST00000442718 389 ntBASIC4.39□□□□□ -1.71
ACTBP60709 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 AL445433.1-201ENST00000457507 257 ntBASIC4.39□□□□□ -1.71
ACTBP60709 AC108161.1-201ENST00000461060 402 ntBASIC4.39□□□□□ -1.71
ACTBP60709 RPSAP39-201ENST00000467439 883 ntBASIC4.39□□□□□ -1.71
ACTBP60709 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ACTBP60709 AC097173.1-201ENST00000505862 819 ntBASIC4.39□□□□□ -1.71
ACTBP60709 AC113430.1-201ENST00000506872 718 ntBASIC4.39□□□□□ -1.71
ACTBP60709 MTATP6P1-201ENST00000514057 681 ntBASIC4.39□□□□□ -1.71
ACTBP60709 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 AC027544.3-201ENST00000535082 757 ntBASIC4.39□□□□□ -1.71
ACTBP60709 YWHABP2-201ENST00000540201 713 ntBASIC4.39□□□□□ -1.71
ACTBP60709 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.39□□□□□ -1.71
ACTBP60709 AC022404.1-201ENST00000555320 273 ntBASIC4.39□□□□□ -1.71
ACTBP60709 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 AC126175.1-201ENST00000617041 758 ntBASIC4.39□□□□□ -1.71
ACTBP60709 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ACTBP60709 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
ACTBP60709 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 RNA5SP319-201ENST00000362768 119 ntBASIC4.38□□□□□ -1.71
ACTBP60709 RPS24P12-201ENST00000402084 394 ntBASIC4.38□□□□□ -1.71
ACTBP60709 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 RPS11P7-201ENST00000442125 465 ntBASIC4.38□□□□□ -1.71
ACTBP60709 MRPL48P1-201ENST00000445390 636 ntBASIC4.38□□□□□ -1.71
ACTBP60709 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.38□□□□□ -1.71
ACTBP60709 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.38□□□□□ -1.71
ACTBP60709 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.38□□□□□ -1.71
ACTBP60709 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.38□□□□□ -1.71
ACTBP60709 RN7SL51P-201ENST00000468230 285 ntBASIC4.38□□□□□ -1.71
ACTBP60709 RN7SL214P-201ENST00000487317 265 ntBASIC4.38□□□□□ -1.71
ACTBP60709 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.38□□□□□ -1.71
ACTBP60709 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.38□□□□□ -1.71
ACTBP60709 AL121839.1-201ENST00000556233 1185 ntBASIC4.38□□□□□ -1.71
ACTBP60709 AC015720.2-201ENST00000567709 334 ntBASIC4.38□□□□□ -1.71
ACTBP60709 AP005119.2-201ENST00000579735 1105 ntBASIC4.38□□□□□ -1.71
ACTBP60709 MIR1273E-201ENST00000581165 102 ntBASIC4.38□□□□□ -1.71
ACTBP60709 MIR3614-201ENST00000581261 86 ntBASIC4.38□□□□□ -1.71
ACTBP60709 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.38□□□□□ -1.71
ACTBP60709 RNF138P2-201ENST00000603490 592 ntBASIC4.38□□□□□ -1.71
ACTBP60709 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 RNA5SP440-201ENST00000612665 119 ntBASIC4.38□□□□□ -1.71
ACTBP60709 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.38□□□□□ -1.71
ACTBP60709 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ACTBP60709 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.38□□□□□ -1.71
ACTBP60709 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ACTBP60709 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.38□□□□□ -1.71
ACTBP60709 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.38□□□□□ -1.71
ACTBP60709 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms