Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC023158.1-201ENST00000561632 1025 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN20P56880 MIR3936-201ENST00000584304 110 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 AC005034.4-201ENST00000603612 899 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 AC109309.2-201ENST00000612597 332 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC022467.1-201ENST00000614738 749 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC022960.3-201ENST00000619794 441 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN20P56880 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 MIR8080-201ENST00000622224 89 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN20P56880 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.98□□□□□ -1.61
CLDN20P56880 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLDN20P56880 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CLDN20P56880 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 OR4F13P-202ENST00000560066 2054 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 AC104260.2-201ENST00000623551 3497 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN20P56880 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLDN20P56880 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 RNU6-1257P-201ENST00000384625 110 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 AL391361.1-201ENST00000405580 489 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN20P56880 Z93019.1-201ENST00000416450 973 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 RPA2P2-201ENST00000419698 796 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN20P56880 NDUFB4P8-201ENST00000435351 367 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 PA2G4P6-201ENST00000438325 1197 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 MTCYBP21-201ENST00000443300 1113 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN20P56880 AC069277.2-201ENST00000454211 432 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN20P56880 RN7SL51P-201ENST00000468230 285 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 SETP6-201ENST00000479329 568 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 EIF1P7-201ENST00000487533 337 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 AL049874.2-201ENST00000492636 288 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 NAMPTP2-201ENST00000505629 1115 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 AC021193.1-201ENST00000511607 420 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 AP003355.1-201ENST00000518956 587 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.97□□□□□ -1.61
CLDN20P56880 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN20P56880 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.97□□□□□ -1.61
CLDN20P56880 AC027026.1-201ENST00000532323 742 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN20P56880 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN20P56880 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN20P56880 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN20P56880 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN20P56880 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CLDN20P56880 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 SNX6P1-201ENST00000601728 1224 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 SUGT1P3-202ENST00000604259 383 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 AC017076.1-201ENST00000607613 578 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 AL359513.1-201ENST00000614364 557 ntBASIC4.97□□□□□ -1.61
CLDN20P56880 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
CLDN20P56880 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CLDN20P56880 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLDN20P56880 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN20P56880 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CLDN20P56880 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN20P56880 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms