Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 RNA5SP187-201ENST00000384400 119 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 OR8V1P-201ENST00000395193 873 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AL356968.2-201ENST00000412769 1257 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AC079809.1-201ENST00000415468 276 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 NDUFB4P8-201ENST00000435351 367 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AC073465.2-201ENST00000440938 498 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 TXNP5-201ENST00000441043 315 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 NOP56P2-201ENST00000447491 769 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 TCEA1P1-201ENST00000449716 880 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 IGHV5-78-201ENST00000450948 295 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.88□□□□□ -1.63
CLDN6P56747 RPS23P7-201ENST00000466210 444 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 PSAT1P4-201ENST00000466500 526 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AC006967.1-201ENST00000467608 589 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 DEFB109A-201ENST00000482450 265 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN6P56747 AC091912.1-201ENST00000511351 248 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 AP001880.2-201ENST00000538233 448 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN6P56747 MIR1254-2-201ENST00000579553 63 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AC010503.3-201ENST00000594355 540 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AP005432.2-201ENST00000608162 586 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 AP005131.7-201ENST00000610087 611 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN6P56747 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 AC112198.2-201ENST00000426589 6996 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CLDN6P56747 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 AC079097.1-201ENST00000512187 1399 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CLDN6P56747 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN6P56747 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 AC100757.1-201ENST00000616872 1835 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLDN6P56747 AC092111.2-201ENST00000611627 1414 ntBASIC4.88□□□□□ -1.63
CLDN6P56747 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLDN6P56747 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CLDN6P56747 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN6P56747 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 SCARNA15-201ENST00000607520 4325 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN6P56747 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN6P56747 SNORA70.2-201ENST00000364506 135 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 U3.22-201ENST00000391120 215 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN6P56747 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN6P56747 CENPIP1-201ENST00000425713 902 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 OR2B7P-201ENST00000429302 934 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 AC093414.1-201ENST00000434712 514 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN6P56747 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN6P56747 AL356390.1-201ENST00000455684 397 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN6P56747 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 AC026782.2-201ENST00000510845 636 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 RFPL4AP3-201ENST00000515267 345 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 SEPT10P1-201ENST00000517342 1162 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN6P56747 PARP1P2-201ENST00000556806 195 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN6P56747 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN6P56747 MIR5096-201ENST00000583713 70 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 AC108738.1-201ENST00000603703 237 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 AC010632.3-201ENST00000611377 369 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 AL162574.1-201ENST00000615702 950 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 AC068831.8-201ENST00000620171 435 ntBASIC4.87□□□□□ -1.63
CLDN6P56747 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN6P56747 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms