Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 OR7E18P-201ENST00000592589 702 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC4P56524 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 SUGT1P3-202ENST00000604259 383 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 BNIP3P19-201ENST00000605397 577 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 CR589904.2-201ENST00000612533 440 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 AC007204.2-201ENST00000615022 616 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 AL049767.1-202ENST00000637826 242 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC4P56524 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HDAC4P56524 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC4P56524 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC4P56524 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC4P56524 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HDAC4P56524 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.61□□□□□ -1.51
HDAC4P56524 RNA5SP443-201ENST00000363083 132 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HDAC4P56524 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HDAC4P56524 RN7SKP278-201ENST00000410504 342 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AL513325.1-201ENST00000417716 1034 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AC093084.1-201ENST00000424233 687 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.61□□□□□ -1.51
HDAC4P56524 ZNF965P-201ENST00000432501 817 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AC007563.3-201ENST00000433233 371 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 XKRY2-201ENST00000442362 1093 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AC007000.2-201ENST00000442564 487 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 AP000942.1-201ENST00000463969 747 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AC093663.2-201ENST00000484625 313 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 RN7SL184P-201ENST00000488308 297 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 RPS23P1-201ENST00000491662 432 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AC104629.1-201ENST00000494226 508 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AL136038.1-201ENST00000497246 351 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.61□□□□□ -1.51
HDAC4P56524 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.61□□□□□ -1.51
HDAC4P56524 AC027338.1-201ENST00000514840 825 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.61□□□□□ -1.51
HDAC4P56524 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.61□□□□□ -1.51
HDAC4P56524 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.61□□□□□ -1.51
HDAC4P56524 AC109635.6-201ENST00000525487 1113 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.61□□□□□ -1.51
HDAC4P56524 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HDAC4P56524 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.61□□□□□ -1.51
HDAC4P56524 RBM22P1-201ENST00000578589 1214 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 MIR3176-201ENST00000582210 90 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.61□□□□□ -1.51
HDAC4P56524 KATNBL1P5-201ENST00000605015 517 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AL136295.6-201ENST00000610486 658 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AL359513.1-201ENST00000614364 557 ntBASIC5.61□□□□□ -1.51
HDAC4P56524 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.61□□□□□ -1.51
HDAC4P56524 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.61□□□□□ -1.51
HDAC4P56524 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HDAC4P56524 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HDAC4P56524 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HDAC4P56524 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HDAC4P56524 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HDAC4P56524 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HDAC4P56524 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HDAC4P56524 AC009501.3-201ENST00000605001 1352 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HDAC4P56524 RNU1-146P-201ENST00000364015 165 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 RNA5SP132-201ENST00000364725 118 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.6□□□□□ -1.51
HDAC4P56524 MIR105-2-201ENST00000385083 81 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 GPS2P1-201ENST00000411761 986 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.6□□□□□ -1.51
HDAC4P56524 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HDAC4P56524 SEC63P1-201ENST00000425785 1258 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 AL121776.1-201ENST00000429337 372 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HDAC4P56524 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.6□□□□□ -1.51
HDAC4P56524 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.6□□□□□ -1.51
HDAC4P56524 CABYRP1-201ENST00000465493 1045 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 AC058823.1-201ENST00000485315 474 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.6□□□□□ -1.51
HDAC4P56524 OR9N1P-202ENST00000494289 481 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 AC093770.1-201ENST00000511559 571 ntBASIC5.6□□□□□ -1.51
HDAC4P56524 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.6□□□□□ -1.51
HDAC4P56524 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.6□□□□□ -1.51
HDAC4P56524 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HDAC4P56524 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms