Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 OR6C69P-201ENST00000394268 893 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.91□□□□□ -1.46
GFRA1P56159 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 RNU2-66P-201ENST00000410650 161 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 RPL21P108-201ENST00000413857 481 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 AL713922.1-201ENST00000416477 747 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 BOLA3P4-201ENST00000418151 400 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC083862.1-201ENST00000427378 1242 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 ARPC3P2-201ENST00000457786 533 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 RPL23AP64-201ENST00000469465 435 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 RN7SL568P-201ENST00000493069 298 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 AC018645.1-201ENST00000505003 109 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 RPL7L1P13-201ENST00000511702 739 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 RNY4P37-201ENST00000516225 96 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 RN7SKP98-201ENST00000517070 156 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 RNU6-1261P-201ENST00000517194 104 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC008562.1-201ENST00000521763 330 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 HIGD1AP6-201ENST00000521833 279 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 AP003033.2-201ENST00000528901 805 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.91□□□□□ -1.46
GFRA1P56159 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 ZNF519P3-201ENST00000557158 1032 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 MT1CP-201ENST00000567054 174 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC015818.6-201ENST00000584274 634 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC093765.1-201ENST00000603758 881 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.91□□□□□ -1.46
GFRA1P56159 AL355073.2-201ENST00000612106 557 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 U6.42-201ENST00000618440 107 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
GFRA1P56159 CDRT1-208ENST00000630868 794 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 PABPC1P9-201ENST00000426076 1612 ntBASIC5.91□□□□□ -1.46
GFRA1P56159 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
GFRA1P56159 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
GFRA1P56159 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GFRA1P56159 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.9□□□□□ -1.46
GFRA1P56159 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
GFRA1P56159 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.9□□□□□ -1.46
GFRA1P56159 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 MAPK10-323ENST00000641493 3207 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AC105114.1-201ENST00000624795 1862 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.9□□□□□ -1.46
GFRA1P56159 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.9□□□□□ -1.46
GFRA1P56159 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
GFRA1P56159 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
GFRA1P56159 RN7SKP250-201ENST00000363924 321 ntBASIC5.9□□□□□ -1.46
GFRA1P56159 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms