Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.16□□□□□ -1.58
CDH6P55285 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH6P55285 ECM1P2-201ENST00000503354 1577 ntBASIC5.16□□□□□ -1.58
CDH6P55285 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH6P55285 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH6P55285 MIPEPP2-201ENST00000422560 1819 ntBASIC5.16□□□□□ -1.58
CDH6P55285 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH6P55285 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH6P55285 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH6P55285 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH6P55285 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH6P55285 MTND5P23-201ENST00000430812 1655 ntBASIC5.16□□□□□ -1.58
CDH6P55285 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH6P55285 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH6P55285 U8.4-201ENST00000363626 134 ntBASIC5.16□□□□□ -1.58
CDH6P55285 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH6P55285 RNU4-34P-201ENST00000410431 124 ntBASIC5.16□□□□□ -1.58
CDH6P55285 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH6P55285 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH6P55285 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH6P55285 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH6P55285 SNRPFP2-201ENST00000440710 251 ntBASIC5.16□□□□□ -1.58
CDH6P55285 AL591623.2-201ENST00000449978 222 ntBASIC5.16□□□□□ -1.58
CDH6P55285 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH6P55285 RFPL4AP5-201ENST00000514977 504 ntBASIC5.16□□□□□ -1.58
CDH6P55285 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH6P55285 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH6P55285 AC005868.1-201ENST00000536421 331 ntBASIC5.16□□□□□ -1.58
CDH6P55285 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH6P55285 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH6P55285 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH6P55285 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH6P55285 AC006116.3-201ENST00000592968 361 ntBASIC5.16□□□□□ -1.58
CDH6P55285 AC104687.2-201ENST00000604442 342 ntBASIC5.16□□□□□ -1.58
CDH6P55285 AC005377.1-201ENST00000605126 456 ntBASIC5.16□□□□□ -1.58
CDH6P55285 AL049794.2-201ENST00000616301 365 ntBASIC5.16□□□□□ -1.58
CDH6P55285 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH6P55285 LINC01739-205ENST00000641890 573 ntBASIC5.16□□□□□ -1.58
CDH6P55285 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH6P55285 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH6P55285 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH6P55285 AP000542.2-201ENST00000623199 6179 ntBASIC5.16□□□□□ -1.58
CDH6P55285 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH6P55285 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH6P55285 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.15□□□□□ -1.58
CDH6P55285 C4BPAP1-201ENST00000415474 1893 ntBASIC5.15□□□□□ -1.58
CDH6P55285 CUL4AP1-201ENST00000514750 1863 ntBASIC5.15□□□□□ -1.58
CDH6P55285 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH6P55285 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.15□□□□□ -1.58
CDH6P55285 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.15□□□□□ -1.58
CDH6P55285 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH6P55285 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH6P55285 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.15□□□□□ -1.58
CDH6P55285 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.58
CDH6P55285 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CDH6P55285 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.15□□□□□ -1.58
CDH6P55285 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CDH6P55285 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CDH6P55285 AL136116.2-201ENST00000404020 785 ntBASIC5.15□□□□□ -1.59
CDH6P55285 SNORA79B-201ENST00000410557 148 ntBASIC5.15□□□□□ -1.59
CDH6P55285 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH6P55285 RHOT1P3-201ENST00000436571 331 ntBASIC5.15□□□□□ -1.59
CDH6P55285 SCAND3P1-201ENST00000439854 1060 ntBASIC5.15□□□□□ -1.59
CDH6P55285 AC012512.1-201ENST00000446594 718 ntBASIC5.15□□□□□ -1.59
CDH6P55285 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH6P55285 GYG1P1-201ENST00000460864 698 ntBASIC5.15□□□□□ -1.59
CDH6P55285 RN7SL177P-201ENST00000476596 299 ntBASIC5.15□□□□□ -1.59
CDH6P55285 BX284632.1-201ENST00000478218 541 ntBASIC5.15□□□□□ -1.59
CDH6P55285 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH6P55285 AC109462.1-201ENST00000491087 368 ntBASIC5.15□□□□□ -1.59
CDH6P55285 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH6P55285 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 AC068993.1-201ENST00000546724 589 ntBASIC5.15□□□□□ -1.59
CDH6P55285 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH6P55285 AL049830.4-201ENST00000555149 351 ntBASIC5.15□□□□□ -1.59
CDH6P55285 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH6P55285 AC234775.3-201ENST00000564612 656 ntBASIC5.15□□□□□ -1.59
CDH6P55285 MIR3691-201ENST00000578066 90 ntBASIC5.15□□□□□ -1.59
CDH6P55285 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH6P55285 AC015914.2-201ENST00000618167 288 ntBASIC5.15□□□□□ -1.59
CDH6P55285 AC087821.1-201ENST00000623639 567 ntBASIC5.15□□□□□ -1.59
CDH6P55285 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH6P55285 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CDH6P55285 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CDH6P55285 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH6P55285 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CDH6P55285 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH6P55285 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH6P55285 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.14□□□□□ -1.59
CDH6P55285 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.14□□□□□ -1.59
CDH6P55285 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms