Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.06□□□□□ -1.28
USP11P51784 SNORA75-201ENST00000384158 137 ntBASIC7.06□□□□□ -1.28
USP11P51784 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
USP11P51784 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
USP11P51784 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.06□□□□□ -1.28
USP11P51784 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 CDY14P-201ENST00000431260 1014 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC091862.1-201ENST00000438016 1100 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.06□□□□□ -1.28
USP11P51784 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.06□□□□□ -1.28
USP11P51784 RPSAP40-201ENST00000442343 891 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.06□□□□□ -1.28
USP11P51784 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.06□□□□□ -1.28
USP11P51784 OR51B8P-201ENST00000449892 769 ntBASIC7.06□□□□□ -1.28
USP11P51784 CDY23P-201ENST00000451661 1014 ntBASIC7.06□□□□□ -1.28
USP11P51784 RPS27AP3-201ENST00000453803 454 ntBASIC7.06□□□□□ -1.28
USP11P51784 RN7SL221P-201ENST00000466190 281 ntBASIC7.06□□□□□ -1.28
USP11P51784 RN7SL165P-201ENST00000477476 291 ntBASIC7.06□□□□□ -1.28
USP11P51784 RPL17P2-201ENST00000491913 451 ntBASIC7.06□□□□□ -1.28
USP11P51784 FCF1P3-201ENST00000496394 590 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.06□□□□□ -1.28
USP11P51784 MTATP6P22-201ENST00000507369 598 ntBASIC7.06□□□□□ -1.28
USP11P51784 MAST4-IT1-201ENST00000514241 658 ntBASIC7.06□□□□□ -1.28
USP11P51784 RNA5SP400-201ENST00000517155 111 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC7.06□□□□□ -1.28
USP11P51784 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.06□□□□□ -1.28
USP11P51784 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 KCTD9P6-201ENST00000522306 950 ntBASIC7.06□□□□□ -1.28
USP11P51784 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC7.06□□□□□ -1.28
USP11P51784 OR6M2P-201ENST00000529831 871 ntBASIC7.06□□□□□ -1.28
USP11P51784 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.06□□□□□ -1.28
USP11P51784 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC7.06□□□□□ -1.28
USP11P51784 UBE2NP1-201ENST00000545592 458 ntBASIC7.06□□□□□ -1.28
USP11P51784 HIGD1AP17-201ENST00000554576 276 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC107958.1-201ENST00000556576 290 ntBASIC7.06□□□□□ -1.28
USP11P51784 AL845552.1-201ENST00000556820 323 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.06□□□□□ -1.28
USP11P51784 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.06□□□□□ -1.28
USP11P51784 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC7.06□□□□□ -1.28
USP11P51784 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.06□□□□□ -1.28
USP11P51784 AC006539.2-201ENST00000601729 572 ntBASIC7.06□□□□□ -1.28
USP11P51784 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 NDUFA8P1-201ENST00000605525 367 ntBASIC7.06□□□□□ -1.28
USP11P51784 AL158211.4-201ENST00000606988 584 ntBASIC7.06□□□□□ -1.28
USP11P51784 AL021368.3-201ENST00000607119 578 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC019131.2-201ENST00000609071 870 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC007497.1-201ENST00000610421 561 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC008443.7-201ENST00000622195 246 ntBASIC7.06□□□□□ -1.28
USP11P51784 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 AC099654.12-201ENST00000639868 649 ntBASIC7.06□□□□□ -1.28
USP11P51784 AC011416.1-201ENST00000514947 1732 ntBASIC7.06□□□□□ -1.28
USP11P51784 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
USP11P51784 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
USP11P51784 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.05□□□□□ -1.28
USP11P51784 AP001541.1-201ENST00000623322 1904 ntBASIC7.05□□□□□ -1.28
USP11P51784 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
USP11P51784 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
USP11P51784 SNORA43.1-201ENST00000364863 140 ntBASIC7.05□□□□□ -1.28
USP11P51784 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.05□□□□□ -1.28
USP11P51784 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
USP11P51784 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.05□□□□□ -1.28
USP11P51784 RN7SKP33-201ENST00000410942 340 ntBASIC7.05□□□□□ -1.28
USP11P51784 AC010975.2-201ENST00000427781 588 ntBASIC7.05□□□□□ -1.28
USP11P51784 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC7.05□□□□□ -1.28
USP11P51784 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC7.05□□□□□ -1.28
USP11P51784 UBE2V1P8-201ENST00000437166 265 ntBASIC7.05□□□□□ -1.28
USP11P51784 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.05□□□□□ -1.28
USP11P51784 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.05□□□□□ -1.28
USP11P51784 COX6CP2-201ENST00000444980 225 ntBASIC7.05□□□□□ -1.28
USP11P51784 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.05□□□□□ -1.28
USP11P51784 HMGB1P48-201ENST00000446155 598 ntBASIC7.05□□□□□ -1.28
USP11P51784 MTCO1P48-201ENST00000448024 1096 ntBASIC7.05□□□□□ -1.28
USP11P51784 BUD31P2-201ENST00000449374 300 ntBASIC7.05□□□□□ -1.28
USP11P51784 CCRL1P1-201ENST00000449542 1053 ntBASIC7.05□□□□□ -1.28
USP11P51784 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.05□□□□□ -1.28
USP11P51784 AC103563.5-201ENST00000455643 364 ntBASIC7.05□□□□□ -1.28
USP11P51784 CTSLP6-201ENST00000458273 1002 ntBASIC7.05□□□□□ -1.28
USP11P51784 AC104339.1-201ENST00000465478 348 ntBASIC7.05□□□□□ -1.28
USP11P51784 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.05□□□□□ -1.28
USP11P51784 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.05□□□□□ -1.28
USP11P51784 AC113347.3-201ENST00000509113 148 ntBASIC7.05□□□□□ -1.28
USP11P51784 RNU6-319P-201ENST00000516025 108 ntBASIC7.05□□□□□ -1.28
USP11P51784 Vault.2-201ENST00000516519 98 ntBASIC7.05□□□□□ -1.28
USP11P51784 Y_RNA.710-201ENST00000516975 110 ntBASIC7.05□□□□□ -1.28
USP11P51784 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.05□□□□□ -1.28
USP11P51784 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms