Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC3P51654 PRPF38AP1-201ENST00000451976 933 ntBASIC5.65□□□□□ -1.5
GPC3P51654 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC3P51654 AC091685.2-201ENST00000454924 864 ntBASIC5.65□□□□□ -1.5
GPC3P51654 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC3P51654 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC3P51654 RPS3AP41-201ENST00000462701 778 ntBASIC5.65□□□□□ -1.5
GPC3P51654 AC020779.1-201ENST00000478757 796 ntBASIC5.65□□□□□ -1.5
GPC3P51654 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC3P51654 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC3P51654 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC3P51654 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.65□□□□□ -1.5
GPC3P51654 AC138832.1-201ENST00000522871 556 ntBASIC5.65□□□□□ -1.5
GPC3P51654 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC3P51654 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC3P51654 AC005000.1-201ENST00000536192 288 ntBASIC5.65□□□□□ -1.5
GPC3P51654 AC068993.1-201ENST00000546724 589 ntBASIC5.65□□□□□ -1.5
GPC3P51654 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC3P51654 AC011270.1-201ENST00000558606 583 ntBASIC5.65□□□□□ -1.5
GPC3P51654 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.65□□□□□ -1.5
GPC3P51654 MIR4675-201ENST00000577898 77 ntBASIC5.65□□□□□ -1.5
GPC3P51654 FAM25E-202ENST00000608562 189 ntBASIC5.65□□□□□ -1.5
GPC3P51654 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.65□□□□□ -1.5
GPC3P51654 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.65□□□□□ -1.51
GPC3P51654 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
GPC3P51654 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GPC3P51654 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.65□□□□□ -1.51
GPC3P51654 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.65□□□□□ -1.51
GPC3P51654 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GPC3P51654 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GPC3P51654 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
GPC3P51654 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC3P51654 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC3P51654 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC3P51654 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC3P51654 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC3P51654 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC3P51654 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC3P51654 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC3P51654 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GPC3P51654 RN7SKP95-201ENST00000362860 303 ntBASIC5.64□□□□□ -1.51
GPC3P51654 RNA5SP187-201ENST00000384400 119 ntBASIC5.64□□□□□ -1.51
GPC3P51654 AL139128.1-201ENST00000413921 941 ntBASIC5.64□□□□□ -1.51
GPC3P51654 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC3P51654 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC3P51654 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC3P51654 AL772161.1-201ENST00000439130 476 ntBASIC5.64□□□□□ -1.51
GPC3P51654 BX842559.2-201ENST00000451418 605 ntBASIC5.64□□□□□ -1.51
GPC3P51654 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC3P51654 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC3P51654 COX6B1P5-201ENST00000509843 249 ntBASIC5.64□□□□□ -1.51
GPC3P51654 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.64□□□□□ -1.51
GPC3P51654 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC3P51654 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC3P51654 BRD9P1-201ENST00000529855 560 ntBASIC5.64□□□□□ -1.51
GPC3P51654 OR7E128P-201ENST00000532736 1024 ntBASIC5.64□□□□□ -1.51
GPC3P51654 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC3P51654 AP005901.4-201ENST00000577336 569 ntBASIC5.64□□□□□ -1.51
GPC3P51654 AC022884.2-201ENST00000578535 580 ntBASIC5.64□□□□□ -1.51
GPC3P51654 MIR3934-201ENST00000579806 107 ntBASIC5.64□□□□□ -1.51
GPC3P51654 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.64□□□□□ -1.51
GPC3P51654 PRPF19P1-201ENST00000584766 898 ntBASIC5.64□□□□□ -1.51
GPC3P51654 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.64□□□□□ -1.51
GPC3P51654 AC087783.2-201ENST00000605070 562 ntBASIC5.64□□□□□ -1.51
GPC3P51654 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC3P51654 AC087385.3-201ENST00000620477 187 ntBASIC5.64□□□□□ -1.51
GPC3P51654 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.64□□□□□ -1.51
GPC3P51654 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC3P51654 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GPC3P51654 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC3P51654 AC092376.2-201ENST00000622621 4116 ntBASIC5.64□□□□□ -1.51
GPC3P51654 AC007996.1-201ENST00000620414 2821 ntBASIC5.64□□□□□ -1.51
GPC3P51654 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GPC3P51654 AC002525.1-201ENST00000624392 1622 ntBASIC5.63□□□□□ -1.51
GPC3P51654 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC3P51654 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC3P51654 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC3P51654 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC3P51654 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GPC3P51654 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC3P51654 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
GPC3P51654 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.63□□□□□ -1.51
GPC3P51654 RNA5SP428-201ENST00000365129 132 ntBASIC5.63□□□□□ -1.51
GPC3P51654 RNA5SP223-201ENST00000365174 120 ntBASIC5.63□□□□□ -1.51
GPC3P51654 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC3P51654 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.63□□□□□ -1.51
GPC3P51654 AC104837.2-201ENST00000427236 424 ntBASIC5.63□□□□□ -1.51
GPC3P51654 AC046176.1-201ENST00000435260 1170 ntBASIC5.63□□□□□ -1.51
GPC3P51654 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.63□□□□□ -1.51
GPC3P51654 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.63□□□□□ -1.51
GPC3P51654 RPL31P44-201ENST00000447680 377 ntBASIC5.63□□□□□ -1.51
GPC3P51654 RPS3AP53-201ENST00000454716 778 ntBASIC5.63□□□□□ -1.51
GPC3P51654 RN7SL591P-201ENST00000496150 292 ntBASIC5.63□□□□□ -1.51
GPC3P51654 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.63□□□□□ -1.51
GPC3P51654 AC025857.1-201ENST00000525252 377 ntBASIC5.63□□□□□ -1.51
GPC3P51654 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.63□□□□□ -1.51
GPC3P51654 AC008033.2-201ENST00000542626 177 ntBASIC5.63□□□□□ -1.51
GPC3P51654 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
GPC3P51654 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GPC3P51654 PCNPP1-201ENST00000552501 511 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms