Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 AC132825.1-201ENST00000463573 2247 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 AC069213.2-201ENST00000420238 366 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 OR2AM1P-201ENST00000422137 422 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AL356806.1-201ENST00000422524 916 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AL390879.2-203ENST00000426943 1121 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.48□□□□□ -1.69
HCFC1P51610 AC114878.1-201ENST00000441166 358 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 TCEA1P3-201ENST00000443005 880 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.48□□□□□ -1.69
HCFC1P51610 AL513533.1-201ENST00000453728 415 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 RPL7P40-201ENST00000481703 745 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC008033.2-201ENST00000542626 177 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.48□□□□□ -1.69
HCFC1P51610 NMNAT1P1-201ENST00000554095 876 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.48□□□□□ -1.69
HCFC1P51610 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.48□□□□□ -1.69
HCFC1P51610 AC068790.4-201ENST00000602474 263 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC009027.1-201ENST00000604510 479 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.48□□□□□ -1.69
HCFC1P51610 RNA5SP439-201ENST00000617595 124 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC105105.5-201ENST00000622635 1294 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AC010872.1-201ENST00000624225 675 ntBASIC4.48□□□□□ -1.69
HCFC1P51610 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.48□□□□□ -1.69
HCFC1P51610 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCFC1P51610 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.47□□□□□ -1.69
HCFC1P51610 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.47□□□□□ -1.69
HCFC1P51610 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HCFC1P51610 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HCFC1P51610 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.47□□□□□ -1.69
HCFC1P51610 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HCFC1P51610 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.47□□□□□ -1.69
HCFC1P51610 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HCFC1P51610 AC079809.1-201ENST00000415468 276 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 AC009506.2-201ENST00000420635 840 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 RCC2P2-201ENST00000422174 918 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.47□□□□□ -1.69
HCFC1P51610 NPM1P25-201ENST00000429734 854 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 ZFAND6P1-201ENST00000434138 605 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.47□□□□□ -1.69
HCFC1P51610 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 IMPA1P1-201ENST00000510718 842 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 AC026782.2-201ENST00000510845 636 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.47□□□□□ -1.69
HCFC1P51610 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.47□□□□□ -1.69
HCFC1P51610 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.47□□□□□ -1.69
HCFC1P51610 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.47□□□□□ -1.69
HCFC1P51610 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.47□□□□□ -1.69
HCFC1P51610 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.47□□□□□ -1.69
HCFC1P51610 DNAJC19P3-201ENST00000594491 331 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.47□□□□□ -1.69
HCFC1P51610 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.47□□□□□ -1.69
HCFC1P51610 AC104820.1-201ENST00000624183 307 ntBASIC4.47□□□□□ -1.69
HCFC1P51610 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.47□□□□□ -1.69
HCFC1P51610 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.47□□□□□ -1.69
HCFC1P51610 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCFC1P51610 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HCFC1P51610 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HCFC1P51610 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HCFC1P51610 MIR133A2-201ENST00000347538 102 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 RPS4XP9-201ENST00000405151 780 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HCFC1P51610 REREP1Y-201ENST00000422655 198 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.46□□□□□ -1.69
HCFC1P51610 REREP2Y-201ENST00000439103 200 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 AC012512.1-201ENST00000446594 718 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 DEFB109A-201ENST00000482450 265 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 RPL7P41-201ENST00000485823 957 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.46□□□□□ -1.69
HCFC1P51610 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.46□□□□□ -1.69
HCFC1P51610 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.46□□□□□ -1.69
HCFC1P51610 AC021193.1-201ENST00000511607 420 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.46□□□□□ -1.69
HCFC1P51610 AC008147.3-201ENST00000548666 354 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.46□□□□□ -1.69
HCFC1P51610 NPM1P5-201ENST00000557228 838 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 LINC00557-201ENST00000563184 1279 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 MIR4277-201ENST00000578298 84 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 MIR4737-201ENST00000583979 81 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.46□□□□□ -1.69
HCFC1P51610 AC083809.1-201ENST00000615051 472 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 AC026367.3-201ENST00000619032 590 ntBASIC4.46□□□□□ -1.69
HCFC1P51610 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.46□□□□□ -1.69
HCFC1P51610 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HCFC1P51610 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HCFC1P51610 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.46□□□□□ -1.7
HCFC1P51610 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
HCFC1P51610 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms