Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR548Y-201ENST00000582739 110 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AC068620.3-201ENST00000602749 560 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC021851.1-201ENST00000608537 1082 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.49□□□□□ -1.69
NKX2-1P43699 OR2BH1P-201ENST00000608850 864 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 AL122125.1-201ENST00000616999 600 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AL136228.1-201ENST00000622221 319 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AP003497.2-201ENST00000624220 967 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AP003485.1-201ENST00000625093 753 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
NKX2-1P43699 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 QRSL1P1-201ENST00000400977 1540 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 LYARP1-201ENST00000436977 1501 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 AL450345.1-202ENST00000605741 3881 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.49□□□□□ -1.69
NKX2-1P43699 AL445437.1-201ENST00000623157 3087 ntBASIC4.49□□□□□ -1.69
NKX2-1P43699 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.49□□□□□ -1.69
NKX2-1P43699 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NKX2-1P43699 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.48□□□□□ -1.69
NKX2-1P43699 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
NKX2-1P43699 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-1P43699 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-1P43699 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 SNORD56.4-201ENST00000363883 71 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 RN7SKP28-201ENST00000364770 305 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AL024507.1-201ENST00000412741 274 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 RPSAP35-201ENST00000413753 818 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 Z68694.1-201ENST00000413929 841 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 VN1R37P-201ENST00000419096 748 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 MTCO3P4-201ENST00000419236 787 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 MTCO2P1-201ENST00000424648 477 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 MTCYBP32-201ENST00000427945 1084 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-1P43699 ETF1P3-201ENST00000430422 1160 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AC005189.1-201ENST00000431286 310 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC090018.1-201ENST00000434369 367 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AL353093.1-201ENST00000441292 436 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC044797.1-201ENST00000445744 679 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AC009963.3-201ENST00000458090 486 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 RPL7P48-201ENST00000461513 746 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 RN7SL273P-201ENST00000481561 299 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-1P43699 RPL32P33-201ENST00000487023 394 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC108729.1-201ENST00000487812 947 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AC108471.1-201ENST00000513977 287 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 RNU5A-7P-201ENST00000515979 116 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC021678.3-201ENST00000517893 476 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-1P43699 WBP1LP3-201ENST00000523033 208 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 LSM3P2-201ENST00000551246 273 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.48□□□□□ -1.69
NKX2-1P43699 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.48□□□□□ -1.69
NKX2-1P43699 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 MIR3154-201ENST00000577829 84 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 MIR4776-2-201ENST00000580204 80 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 MIR4472-2-201ENST00000582069 67 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AC026979.4-201ENST00000606555 645 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC034229.4-201ENST00000607861 441 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 AL365181.4-201ENST00000609800 547 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms