Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.18□□□□□ -1.74
COL8A2P25067 AL450023.3-201ENST00000440592 271 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.18□□□□□ -1.74
COL8A2P25067 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.18□□□□□ -1.74
COL8A2P25067 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.18□□□□□ -1.74
COL8A2P25067 SERPINA7P1-201ENST00000443077 631 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.18□□□□□ -1.74
COL8A2P25067 AL356390.1-201ENST00000455684 397 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 AC007686.1-201ENST00000488511 463 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 AC069304.1-201ENST00000491593 704 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 MYL12BP2-201ENST00000503948 512 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 AC098976.1-201ENST00000513014 541 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.18□□□□□ -1.74
COL8A2P25067 AC100784.1-201ENST00000522790 310 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 OR8A2P-201ENST00000528631 952 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.18□□□□□ -1.74
COL8A2P25067 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.18□□□□□ -1.74
COL8A2P25067 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.18□□□□□ -1.74
COL8A2P25067 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.18□□□□□ -1.74
COL8A2P25067 AC104785.1-201ENST00000603220 588 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 AC020910.3-201ENST00000603701 874 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 AC087821.1-201ENST00000623639 567 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.18□□□□□ -1.74
COL8A2P25067 AL672167.1-205ENST00000641112 3080 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.18□□□□□ -1.74
COL8A2P25067 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
COL8A2P25067 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.18□□□□□ -1.74
COL8A2P25067 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL8A2P25067 AC012618.3-205ENST00000637896 1496 ntBASIC4.18□□□□□ -1.74
COL8A2P25067 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.17□□□□□ -1.74
COL8A2P25067 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.17□□□□□ -1.74
COL8A2P25067 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.17□□□□□ -1.74
COL8A2P25067 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
COL8A2P25067 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL8A2P25067 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.17□□□□□ -1.74
COL8A2P25067 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL8A2P25067 CYB5AP4-201ENST00000396692 399 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.17□□□□□ -1.74
COL8A2P25067 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.17□□□□□ -1.74
COL8A2P25067 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.17□□□□□ -1.74
COL8A2P25067 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.17□□□□□ -1.74
COL8A2P25067 AC046176.1-201ENST00000435260 1170 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 RPS29P9-201ENST00000440360 171 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 RPL23AP56-201ENST00000460778 453 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 AC090142.2-201ENST00000483263 416 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 USP9YP2-201ENST00000504503 1000 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.17□□□□□ -1.74
COL8A2P25067 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.17□□□□□ -1.74
COL8A2P25067 USP9YP1-201ENST00000513521 1002 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.17□□□□□ -1.74
COL8A2P25067 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.17□□□□□ -1.74
COL8A2P25067 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.17□□□□□ -1.74
COL8A2P25067 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.17□□□□□ -1.74
COL8A2P25067 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.17□□□□□ -1.74
COL8A2P25067 TVP23CP2-201ENST00000571473 623 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.17□□□□□ -1.74
COL8A2P25067 MIR4737-201ENST00000583979 81 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 AC006272.2-201ENST00000594725 163 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 AC091932.2-201ENST00000623014 291 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
COL8A2P25067 ECM1P2-201ENST00000503354 1577 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL8A2P25067 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
COL8A2P25067 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
COL8A2P25067 AC011755.1-201ENST00000623763 2049 ntBASIC4.17□□□□□ -1.74
COL8A2P25067 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL8A2P25067 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.17□□□□□ -1.74
COL8A2P25067 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL8A2P25067 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.16□□□□□ -1.74
COL8A2P25067 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.16□□□□□ -1.74
COL8A2P25067 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
COL8A2P25067 RNA5SP87-201ENST00000384155 118 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 U3.32-201ENST00000408116 212 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 RN7SKP216-201ENST00000411050 312 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 Y_RNA.625-201ENST00000411256 107 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.16□□□□□ -1.74
COL8A2P25067 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.16□□□□□ -1.74
COL8A2P25067 GTF2IP5-201ENST00000414608 731 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 RPA2P2-201ENST00000419698 796 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.16□□□□□ -1.74
COL8A2P25067 SCAND3P1-201ENST00000439854 1060 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 RPL7AP61-201ENST00000443410 636 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.16□□□□□ -1.74
COL8A2P25067 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.16□□□□□ -1.74
COL8A2P25067 AC234781.3-201ENST00000452540 973 ntBASIC4.16□□□□□ -1.74
COL8A2P25067 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms