Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MT-TH-201ENST00000387441 69 ntBASIC7.17□□□□□ -1.26
LIG1P18858 CHMP1B2P-201ENST00000399581 597 ntBASIC7.17□□□□□ -1.26
LIG1P18858 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.17□□□□□ -1.26
LIG1P18858 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG1P18858 AL157884.1-201ENST00000424561 454 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 AL354707.3-201ENST00000427308 331 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 RBMX2P4-201ENST00000441256 376 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AL512326.1-201ENST00000443050 721 ntBASIC7.17□□□□□ -1.26
LIG1P18858 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 AC005165.2-201ENST00000466070 380 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AC107015.1-201ENST00000466902 747 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 MTATP6P22-201ENST00000507369 598 ntBASIC7.17□□□□□ -1.26
LIG1P18858 CBX3P3-201ENST00000508108 532 ntBASIC7.17□□□□□ -1.26
LIG1P18858 GUSBP9-201ENST00000510138 584 ntBASIC7.17□□□□□ -1.26
LIG1P18858 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 AC026782.2-201ENST00000510845 636 ntBASIC7.17□□□□□ -1.26
LIG1P18858 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.17□□□□□ -1.26
LIG1P18858 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 MTCO3P15-201ENST00000526563 574 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AL133399.1-201ENST00000527476 298 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AP003033.2-201ENST00000528901 805 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG1P18858 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.17□□□□□ -1.26
LIG1P18858 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG1P18858 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG1P18858 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 AC004805.3-201ENST00000603178 310 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AL109618.2-201ENST00000605527 211 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AL451049.1-201ENST00000608672 497 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AC012676.3-201ENST00000614983 479 ntBASIC7.17□□□□□ -1.26
LIG1P18858 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 AC139769.3-201ENST00000618383 175 ntBASIC7.17□□□□□ -1.26
LIG1P18858 LINC02495-203ENST00000636704 242 ntBASIC7.17□□□□□ -1.26
LIG1P18858 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG1P18858 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG1P18858 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
LIG1P18858 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
LIG1P18858 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
LIG1P18858 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
LIG1P18858 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 SNORD65C-201ENST00000390962 71 ntBASIC7.16□□□□□ -1.26
LIG1P18858 SNORA26.8-201ENST00000391306 124 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AL121835.1-201ENST00000404250 354 ntBASIC7.16□□□□□ -1.26
LIG1P18858 USP9YP33-201ENST00000412220 421 ntBASIC7.16□□□□□ -1.26
LIG1P18858 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 AK4P4-201ENST00000419465 646 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG1P18858 MTCO1P52-201ENST00000433928 531 ntBASIC7.16□□□□□ -1.26
LIG1P18858 ARAFP2-201ENST00000440565 559 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.16□□□□□ -1.26
LIG1P18858 CDC27P1-201ENST00000445384 715 ntBASIC7.16□□□□□ -1.26
LIG1P18858 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.16□□□□□ -1.26
LIG1P18858 AC239798.3-201ENST00000454459 408 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AL445687.2-201ENST00000458156 728 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC073594.1-201ENST00000462065 364 ntBASIC7.16□□□□□ -1.26
LIG1P18858 SNRPCP3-201ENST00000474888 476 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC114728.1-201ENST00000488289 483 ntBASIC7.16□□□□□ -1.26
LIG1P18858 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.16□□□□□ -1.26
LIG1P18858 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG1P18858 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 AC109464.2-201ENST00000510242 943 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC079140.3-201ENST00000511111 550 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AC091965.2-201ENST00000512324 613 ntBASIC7.16□□□□□ -1.26
LIG1P18858 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 AC135983.3-201ENST00000528049 1226 ntBASIC7.16□□□□□ -1.26
LIG1P18858 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
LIG1P18858 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG1P18858 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG1P18858 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG1P18858 AADACP1-206ENST00000561502 1193 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms