Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC078909.2-201ENST00000620584 398 ntBASIC6.6□□□□□ -1.35
NID1P14543 AC027506.1-201ENST00000621395 198 ntBASIC6.6□□□□□ -1.35
NID1P14543 AC005858.4-201ENST00000623191 700 ntBASIC6.6□□□□□ -1.35
NID1P14543 RPL23AP61-201ENST00000623642 466 ntBASIC6.6□□□□□ -1.35
NID1P14543 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.6□□□□□ -1.35
NID1P14543 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.6□□□□□ -1.35
NID1P14543 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.6□□□□□ -1.35
NID1P14543 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NID1P14543 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.6□□□□□ -1.35
NID1P14543 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.6□□□□□ -1.35
NID1P14543 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.6□□□□□ -1.35
NID1P14543 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.6□□□□□ -1.35
NID1P14543 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.6□□□□□ -1.35
NID1P14543 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.6□□□□□ -1.35
NID1P14543 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NID1P14543 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.59□□□□□ -1.35
NID1P14543 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.59□□□□□ -1.35
NID1P14543 AC006511.3-201ENST00000624929 1783 ntBASIC6.59□□□□□ -1.35
NID1P14543 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 AP003175.1-201ENST00000641383 6658 ntBASIC6.59□□□□□ -1.35
NID1P14543 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NID1P14543 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.59□□□□□ -1.35
NID1P14543 AC015689.2-201ENST00000528172 1738 ntBASIC6.59□□□□□ -1.35
NID1P14543 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
NID1P14543 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.59□□□□□ -1.35
NID1P14543 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NID1P14543 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
NID1P14543 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 Y_RNA.202-201ENST00000364083 110 ntBASIC6.59□□□□□ -1.35
NID1P14543 RN7SKP107-201ENST00000364157 290 ntBASIC6.59□□□□□ -1.35
NID1P14543 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 RNU6-574P-201ENST00000384265 107 ntBASIC6.59□□□□□ -1.35
NID1P14543 RNU6-196P-201ENST00000384315 107 ntBASIC6.59□□□□□ -1.35
NID1P14543 Y_RNA.474-201ENST00000384341 102 ntBASIC6.59□□□□□ -1.35
NID1P14543 RN7SKP62-201ENST00000384539 329 ntBASIC6.59□□□□□ -1.35
NID1P14543 RN7SKP140-201ENST00000411196 284 ntBASIC6.59□□□□□ -1.35
NID1P14543 AL592293.2-201ENST00000422292 996 ntBASIC6.59□□□□□ -1.35
NID1P14543 EIF1P3-201ENST00000423841 334 ntBASIC6.59□□□□□ -1.35
NID1P14543 HMGB3P12-201ENST00000438745 556 ntBASIC6.59□□□□□ -1.35
NID1P14543 AL512605.1-202ENST00000441919 381 ntBASIC6.59□□□□□ -1.35
NID1P14543 RPS26P30-201ENST00000443431 335 ntBASIC6.59□□□□□ -1.35
NID1P14543 AL022237.1-201ENST00000446663 358 ntBASIC6.59□□□□□ -1.35
NID1P14543 COX6CP18-201ENST00000448769 222 ntBASIC6.59□□□□□ -1.35
NID1P14543 RPL7P48-201ENST00000461513 746 ntBASIC6.59□□□□□ -1.35
NID1P14543 RN7SL392P-201ENST00000473024 299 ntBASIC6.59□□□□□ -1.35
NID1P14543 AC117394.1-201ENST00000477323 567 ntBASIC6.59□□□□□ -1.35
NID1P14543 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.59□□□□□ -1.35
NID1P14543 AC073522.1-201ENST00000483312 377 ntBASIC6.59□□□□□ -1.35
NID1P14543 RN7SL775P-201ENST00000498361 336 ntBASIC6.59□□□□□ -1.35
NID1P14543 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.59□□□□□ -1.35
NID1P14543 AC139783.2-201ENST00000504847 1145 ntBASIC6.59□□□□□ -1.35
NID1P14543 CCDC34P1-201ENST00000507441 517 ntBASIC6.59□□□□□ -1.35
NID1P14543 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.59□□□□□ -1.35
NID1P14543 RPL7L1P13-201ENST00000511702 739 ntBASIC6.59□□□□□ -1.35
NID1P14543 RNY4P37-201ENST00000516225 96 ntBASIC6.59□□□□□ -1.35
NID1P14543 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.59□□□□□ -1.35
NID1P14543 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.59□□□□□ -1.35
NID1P14543 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.59□□□□□ -1.35
NID1P14543 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.59□□□□□ -1.35
NID1P14543 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.59□□□□□ -1.35
NID1P14543 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
NID1P14543 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.59□□□□□ -1.35
NID1P14543 RN7SL131P-201ENST00000579043 256 ntBASIC6.59□□□□□ -1.35
NID1P14543 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.59□□□□□ -1.35
NID1P14543 AL355598.1-201ENST00000604169 202 ntBASIC6.59□□□□□ -1.35
NID1P14543 AC113139.1-201ENST00000605049 239 ntBASIC6.59□□□□□ -1.35
NID1P14543 RN7SL778P-201ENST00000607160 297 ntBASIC6.59□□□□□ -1.35
NID1P14543 AC104184.1-201ENST00000607513 721 ntBASIC6.59□□□□□ -1.35
NID1P14543 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.59□□□□□ -1.35
NID1P14543 uc_338.5-201ENST00000611839 155 ntBASIC6.59□□□□□ -1.35
NID1P14543 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.59□□□□□ -1.35
NID1P14543 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.59□□□□□ -1.35
NID1P14543 AC073488.7-201ENST00000633785 778 ntBASIC6.59□□□□□ -1.35
NID1P14543 TPTEP1-208ENST00000636884 213 ntBASIC6.59□□□□□ -1.35
NID1P14543 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NID1P14543 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
NID1P14543 AL121949.2-201ENST00000403446 1548 ntBASIC6.59□□□□□ -1.35
NID1P14543 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NID1P14543 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NID1P14543 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NID1P14543 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.59□□□□□ -1.36
NID1P14543 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms