Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PCNAP12004 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PCNAP12004 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.32□□□□□ -1.56
PCNAP12004 AC132825.1-201ENST00000463573 2247 ntBASIC5.32□□□□□ -1.56
PCNAP12004 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCNAP12004 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCNAP12004 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 AC079298.1-201ENST00000625026 1619 ntBASIC5.31□□□□□ -1.56
PCNAP12004 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 RAD1P1-201ENST00000231383 813 ntBASIC5.31□□□□□ -1.56
PCNAP12004 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PCNAP12004 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PCNAP12004 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.31□□□□□ -1.56
PCNAP12004 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 RNU6-796P-201ENST00000391086 107 ntBASIC5.31□□□□□ -1.56
PCNAP12004 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.31□□□□□ -1.56
PCNAP12004 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 AC093716.1-201ENST00000435923 377 ntBASIC5.31□□□□□ -1.56
PCNAP12004 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.31□□□□□ -1.56
PCNAP12004 AL645931.1-201ENST00000439737 410 ntBASIC5.31□□□□□ -1.56
PCNAP12004 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.31□□□□□ -1.56
PCNAP12004 AC084754.1-201ENST00000463466 464 ntBASIC5.31□□□□□ -1.56
PCNAP12004 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.31□□□□□ -1.56
PCNAP12004 RN7SKP99-201ENST00000517028 307 ntBASIC5.31□□□□□ -1.56
PCNAP12004 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PCNAP12004 DUX4L52-201ENST00000549363 777 ntBASIC5.31□□□□□ -1.56
PCNAP12004 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 AC021483.2-201ENST00000567415 758 ntBASIC5.31□□□□□ -1.56
PCNAP12004 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 CBX3P2-202ENST00000583365 535 ntBASIC5.31□□□□□ -1.56
PCNAP12004 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 SNX6P1-201ENST00000601728 1224 ntBASIC5.31□□□□□ -1.56
PCNAP12004 AC005034.4-201ENST00000603612 899 ntBASIC5.31□□□□□ -1.56
PCNAP12004 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 BNIP3P41-202ENST00000616656 861 ntBASIC5.31□□□□□ -1.56
PCNAP12004 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 MIR1910-201ENST00000636955 80 ntBASIC5.31□□□□□ -1.56
PCNAP12004 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 AC008691.1-209ENST00000642094 814 ntBASIC5.31□□□□□ -1.56
PCNAP12004 OR8A1-204ENST00000642111 1145 ntBASIC5.31□□□□□ -1.56
PCNAP12004 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCNAP12004 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PCNAP12004 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.31□□□□□ -1.56
PCNAP12004 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 AL034549.2-201ENST00000618285 3373 ntBASIC5.3□□□□□ -1.56
PCNAP12004 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCNAP12004 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCNAP12004 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 RN7SKP6-201ENST00000364795 319 ntBASIC5.3□□□□□ -1.56
PCNAP12004 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 RNU6-1005P-201ENST00000384519 107 ntBASIC5.3□□□□□ -1.56
PCNAP12004 RNA5SP284-201ENST00000384547 118 ntBASIC5.3□□□□□ -1.56
PCNAP12004 RNU6-1263P-201ENST00000384601 106 ntBASIC5.3□□□□□ -1.56
PCNAP12004 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCNAP12004 GAPDHP42-201ENST00000406848 981 ntBASIC5.3□□□□□ -1.56
PCNAP12004 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCNAP12004 RN7SKP247-201ENST00000411094 308 ntBASIC5.3□□□□□ -1.56
PCNAP12004 OR6E1P-201ENST00000414424 923 ntBASIC5.3□□□□□ -1.56
PCNAP12004 HYALP1-201ENST00000417674 1279 ntBASIC5.3□□□□□ -1.56
PCNAP12004 RPA2P2-201ENST00000419698 796 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AL606495.1-201ENST00000422100 813 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AC007161.1-204ENST00000423039 460 ntBASIC5.3□□□□□ -1.56
PCNAP12004 VN1R42P-201ENST00000424651 344 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AC002069.1-201ENST00000429649 1159 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms