Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC091862.1-201ENST00000438016 1100 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 ELOCP10-201ENST00000440624 327 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 CNOT7P2-201ENST00000441051 832 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AC064862.4-201ENST00000442180 334 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 RPS26P39-201ENST00000469206 341 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AL136038.1-201ENST00000497246 351 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AC090058.1-201ENST00000498788 435 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 CDC42P4-201ENST00000510507 563 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 SEPT10P1-201ENST00000517342 1162 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AC010198.2-201ENST00000550612 259 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AC245505.1-201ENST00000556398 224 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AC007225.2-201ENST00000562529 256 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AC002400.1-201ENST00000569310 726 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 MIR4489-201ENST00000578869 62 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AC022146.1-201ENST00000595307 847 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 ELOCP34-201ENST00000604436 327 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AC007497.1-201ENST00000610421 561 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 SEPT14P19-203ENST00000633205 211 ntBASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC8.29□□□□□ -1.08
CSB-PGBD3P0DP91 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC022325.1-201ENST00000502748 2199 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 SGO1P2-201ENST00000429458 1589 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC107980.1-201ENST00000558671 3355 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 DEFB108C-201ENST00000400154 252 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 U3.43-201ENST00000410734 213 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 RN7SKP161-201ENST00000411110 305 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC004074.1-201ENST00000421810 1063 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 MTCO3P1-205ENST00000422088 832 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 BX510359.3-201ENST00000422168 306 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 MTND1P32-201ENST00000433043 938 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AL118496.2-201ENST00000448300 230 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AL445665.1-202ENST00000452436 324 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 ZNF114P1-201ENST00000453500 292 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 LINC00888-204ENST00000487386 421 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC092045.1-201ENST00000495716 1231 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC002456.2-201ENST00000509356 380 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC091965.2-201ENST00000512324 613 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 WBP1LP3-201ENST00000523033 208 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AP002963.1-201ENST00000530590 184 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AKIRIN1P1-201ENST00000547384 544 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 CENPUP2-201ENST00000555897 1186 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AADACP1-206ENST00000561502 1193 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 OR4G1P-201ENST00000588632 938 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC005034.5-201ENST00000604219 466 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC009509.4-201ENST00000619202 509 ntBASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.28□□□□□ -1.08
CSB-PGBD3P0DP91 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms