Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.84□□□□□ -1.31
HMGB1P09429 AL161713.1-201ENST00000555538 145 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 AC107958.1-201ENST00000556576 290 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.84□□□□□ -1.31
HMGB1P09429 EIF1P5-201ENST00000585002 234 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGB1P09429 ABI1P1-201ENST00000603375 1120 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGB1P09429 AC018926.3-201ENST00000618841 406 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGB1P09429 AP000843.1-201ENST00000624880 701 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 MIR6715B-201ENST00000637172 77 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 OR52B5P-202ENST00000641118 1110 ntBASIC6.84□□□□□ -1.31
HMGB1P09429 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
HMGB1P09429 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC6.84□□□□□ -1.31
HMGB1P09429 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HMGB1P09429 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HMGB1P09429 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HMGB1P09429 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HMGB1P09429 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 AC046144.1-201ENST00000478559 1853 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
HMGB1P09429 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGB1P09429 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGB1P09429 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 MIR133A2-201ENST00000347538 102 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 RNA5SP500-201ENST00000364486 119 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 RN7SKP81-201ENST00000365603 331 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 SUGT1P2-201ENST00000379452 992 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 RNU1-136P-201ENST00000384181 164 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
HMGB1P09429 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGB1P09429 AC099535.1-201ENST00000408928 371 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGB1P09429 AC004987.3-201ENST00000413879 771 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 AK4P4-201ENST00000419465 646 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 OR5AW1P-201ENST00000426334 1006 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 AC126120.1-201ENST00000431082 470 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.83□□□□□ -1.32
HMGB1P09429 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGB1P09429 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGB1P09429 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGB1P09429 AC009263.1-201ENST00000441193 1239 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGB1P09429 GXYLT1P1-201ENST00000446657 490 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGB1P09429 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGB1P09429 AC093166.4-201ENST00000457867 318 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 AP002884.1-201ENST00000479691 655 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 RN7SL570P-201ENST00000484405 292 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGB1P09429 OR5H7P-201ENST00000514084 930 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 RNA5SP438-201ENST00000516561 112 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGB1P09429 CR383656.14-201ENST00000551951 406 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.83□□□□□ -1.32
HMGB1P09429 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
HMGB1P09429 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGB1P09429 RN7SL622P-201ENST00000585292 275 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 AL392112.1-201ENST00000605115 829 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 AC000095.2-202ENST00000637415 154 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HMGB1P09429 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.83□□□□□ -1.32
HMGB1P09429 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.83□□□□□ -1.32
HMGB1P09429 AC021242.1-201ENST00000507315 2035 ntBASIC6.83□□□□□ -1.32
HMGB1P09429 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HMGB1P09429 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HMGB1P09429 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HMGB1P09429 SNORA63.3-201ENST00000362682 132 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 RNA5SP433-201ENST00000364491 114 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 RN7SKP275-201ENST00000364626 301 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGB1P09429 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.82□□□□□ -1.32
HMGB1P09429 AL035660.1-201ENST00000422041 222 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 VTI1BP4-201ENST00000427516 527 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 AL512637.2-201ENST00000431287 1256 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGB1P09429 AC242426.1-201ENST00000435270 960 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGB1P09429 AC110602.1-201ENST00000437414 318 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.82□□□□□ -1.32
HMGB1P09429 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGB1P09429 HMGB1P48-201ENST00000446155 598 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGB1P09429 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGB1P09429 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.82□□□□□ -1.32
HMGB1P09429 RPS23P2-201ENST00000463671 415 ntBASIC6.82□□□□□ -1.32
HMGB1P09429 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGB1P09429 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.82□□□□□ -1.32
HMGB1P09429 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HMGB1P09429 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGB1P09429 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.82□□□□□ -1.32
HMGB1P09429 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms