Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.25□□□□□ -1.57
RETP07949 MIR5096-201ENST00000583713 70 ntBASIC5.25□□□□□ -1.57
RETP07949 AC026367.3-201ENST00000619032 590 ntBASIC5.25□□□□□ -1.57
RETP07949 MIR7703-201ENST00000620784 77 ntBASIC5.25□□□□□ -1.57
RETP07949 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.25□□□□□ -1.57
RETP07949 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.25□□□□□ -1.57
RETP07949 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RETP07949 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RETP07949 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RETP07949 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RETP07949 NXF4-202ENST00000416098 1465 ntBASIC5.25□□□□□ -1.57
RETP07949 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.25□□□□□ -1.57
RETP07949 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RETP07949 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.24□□□□□ -1.57
RETP07949 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
RETP07949 AC007996.1-201ENST00000620414 2821 ntBASIC5.24□□□□□ -1.57
RETP07949 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RETP07949 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RETP07949 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RETP07949 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RETP07949 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.24□□□□□ -1.57
RETP07949 RANP7-201ENST00000418085 644 ntBASIC5.24□□□□□ -1.57
RETP07949 RPL17P36-201ENST00000420302 549 ntBASIC5.24□□□□□ -1.57
RETP07949 AC016772.1-201ENST00000444170 1261 ntBASIC5.24□□□□□ -1.57
RETP07949 RPL10P17-201ENST00000453852 316 ntBASIC5.24□□□□□ -1.57
RETP07949 RN7SL817P-201ENST00000480777 288 ntBASIC5.24□□□□□ -1.57
RETP07949 HMGN2P25-201ENST00000486956 268 ntBASIC5.24□□□□□ -1.57
RETP07949 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
RETP07949 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.24□□□□□ -1.57
RETP07949 BTF3P13-201ENST00000513224 490 ntBASIC5.24□□□□□ -1.57
RETP07949 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.24□□□□□ -1.57
RETP07949 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.24□□□□□ -1.57
RETP07949 LSM3P2-201ENST00000551246 273 ntBASIC5.24□□□□□ -1.57
RETP07949 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.24□□□□□ -1.57
RETP07949 RN7SL290P-201ENST00000578661 300 ntBASIC5.24□□□□□ -1.57
RETP07949 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.24□□□□□ -1.57
RETP07949 AC008833.1-201ENST00000611633 691 ntBASIC5.24□□□□□ -1.57
RETP07949 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.24□□□□□ -1.57
RETP07949 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.24□□□□□ -1.57
RETP07949 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RETP07949 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RETP07949 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RETP07949 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RETP07949 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.24□□□□□ -1.57
RETP07949 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RETP07949 NAMPTP1-201ENST00000440465 2514 ntBASIC5.24□□□□□ -1.57
RETP07949 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RETP07949 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.24□□□□□ -1.57
RETP07949 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.23□□□□□ -1.57
RETP07949 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RETP07949 AC100757.1-201ENST00000616872 1835 ntBASIC5.23□□□□□ -1.57
RETP07949 AC011755.1-201ENST00000623763 2049 ntBASIC5.23□□□□□ -1.57
RETP07949 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.23□□□□□ -1.57
RETP07949 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.23□□□□□ -1.57
RETP07949 AC004817.4-201ENST00000602396 3625 ntBASIC5.23□□□□□ -1.57
RETP07949 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RETP07949 BMS1P3-201ENST00000372011 932 ntBASIC5.23□□□□□ -1.57
RETP07949 VDAC2P1-201ENST00000399358 958 ntBASIC5.23□□□□□ -1.57
RETP07949 PPIAP9-201ENST00000403866 498 ntBASIC5.23□□□□□ -1.57
RETP07949 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.23□□□□□ -1.57
RETP07949 RN7SKP27-201ENST00000410684 333 ntBASIC5.23□□□□□ -1.57
RETP07949 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.23□□□□□ -1.57
RETP07949 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RETP07949 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 RPL18P10-201ENST00000425606 538 ntBASIC5.23□□□□□ -1.57
RETP07949 RPL7AP49-201ENST00000429522 581 ntBASIC5.23□□□□□ -1.57
RETP07949 AL591438.1-201ENST00000433508 581 ntBASIC5.23□□□□□ -1.57
RETP07949 OR52E3P-201ENST00000452083 936 ntBASIC5.23□□□□□ -1.57
RETP07949 AP000942.1-201ENST00000463969 747 ntBASIC5.23□□□□□ -1.57
RETP07949 AC140172.1-201ENST00000502928 141 ntBASIC5.23□□□□□ -1.57
RETP07949 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.23□□□□□ -1.57
RETP07949 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
RETP07949 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.23□□□□□ -1.57
RETP07949 MIR4691-201ENST00000583764 85 ntBASIC5.23□□□□□ -1.57
RETP07949 RPL26P30-202ENST00000602923 645 ntBASIC5.23□□□□□ -1.57
RETP07949 AP001005.3-201ENST00000622049 129 ntBASIC5.23□□□□□ -1.57
RETP07949 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.23□□□□□ -1.57
RETP07949 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.23□□□□□ -1.57
RETP07949 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RETP07949 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.23□□□□□ -1.57
RETP07949 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.23□□□□□ -1.57
RETP07949 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RETP07949 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
RETP07949 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RETP07949 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.22□□□□□ -1.57
RETP07949 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RETP07949 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms