Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 NDUFA5P12-201ENST00000503796 343 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 USP9YP2-201ENST00000504503 1000 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 USP9YP1-201ENST00000513521 1002 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 RNA5SP303-201ENST00000516192 130 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AC009117.1-201ENST00000563948 554 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 OR1F2P-201ENST00000570470 933 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AL021707.7-201ENST00000607991 416 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 OR8G7P-201ENST00000616658 848 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 SMG1P4-204ENST00000523028 4131 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AL034370.1-201ENST00000397254 1590 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 SOCS5P3-201ENST00000425115 1576 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 AC005261.6-201ENST00000623072 1387 ntBASIC4.9□□□□□ -1.63
HLA-DQB2P05538 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DQB2P05538 TLK1P1-201ENST00000456760 2440 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC000374.1-201ENST00000434698 1745 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 RNA5SP191-201ENST00000362585 102 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 RPS26P13-201ENST00000419030 330 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 LINC00993-201ENST00000420453 540 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 E2F6P2-201ENST00000420708 748 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 OR2B7P-201ENST00000429302 934 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 PA2G4P6-201ENST00000438325 1197 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AL136455.1-201ENST00000441083 1240 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 RPL7P16-201ENST00000479738 738 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 RPL32P9-201ENST00000487963 407 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AP000676.2-201ENST00000529711 301 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 BNIP3P1-201ENST00000547295 580 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC087477.6-201ENST00000559595 843 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 RN7SL802P-201ENST00000577858 299 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC022726.1-201ENST00000587475 207 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC010487.1-201ENST00000594408 1172 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC006453.5-201ENST00000636451 619 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC112255.1-201ENST00000624070 2493 ntBASIC4.89□□□□□ -1.63
HLA-DQB2P05538 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DQB2P05538 AC120036.2-201ENST00000509729 1474 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AC114755.2-201ENST00000413520 361 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AL451139.1-201ENST00000434718 346 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 HIGD1AP8-201ENST00000453927 274 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 RN7SL591P-201ENST00000496150 292 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 NDUFB5P1-201ENST00000508134 564 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AC133555.2-201ENST00000550213 292 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 MIR5699-201ENST00000578903 90 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AL031320.1-201ENST00000604177 357 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms