Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 SMG1P4-204ENST00000523028 4131 ntBASIC5.21□□□□□ -1.58
LDLRP01130 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 AC083899.2-201ENST00000423285 1376 ntBASIC5.2□□□□□ -1.58
LDLRP01130 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.2□□□□□ -1.58
LDLRP01130 TRIM51GP-201ENST00000534741 1350 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AL512283.1-201ENST00000606756 1384 ntBASIC5.2□□□□□ -1.58
LDLRP01130 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 AC007618.1-201ENST00000366455 732 ntBASIC5.2□□□□□ -1.58
LDLRP01130 SNORA56-201ENST00000383966 129 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AL645733.1-201ENST00000402250 217 ntBASIC5.2□□□□□ -1.58
LDLRP01130 RPL21P67-201ENST00000402896 478 ntBASIC5.2□□□□□ -1.58
LDLRP01130 COX5BP7-201ENST00000414780 274 ntBASIC5.2□□□□□ -1.58
LDLRP01130 SLC35E1P1-201ENST00000419313 864 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.2□□□□□ -1.58
LDLRP01130 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LDLRP01130 HSPD1P12-201ENST00000429127 1069 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 AC074367.1-201ENST00000438685 1125 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 AL596266.1-201ENST00000448132 400 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AC090804.1-201ENST00000448870 490 ntBASIC5.2□□□□□ -1.58
LDLRP01130 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.2□□□□□ -1.58
LDLRP01130 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 PRPF38AP1-201ENST00000451976 933 ntBASIC5.2□□□□□ -1.58
LDLRP01130 MTND2P30-201ENST00000456663 382 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AC245028.2-201ENST00000458673 253 ntBASIC5.2□□□□□ -1.58
LDLRP01130 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.2□□□□□ -1.58
LDLRP01130 RPSAP50-201ENST00000481955 852 ntBASIC5.2□□□□□ -1.58
LDLRP01130 RN7SL570P-201ENST00000484405 292 ntBASIC5.2□□□□□ -1.58
LDLRP01130 EIF1P7-201ENST00000487533 337 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AC069304.1-201ENST00000491593 704 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AC023424.1-201ENST00000496058 459 ntBASIC5.2□□□□□ -1.58
LDLRP01130 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.2□□□□□ -1.58
LDLRP01130 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LDLRP01130 AP003049.1-201ENST00000529418 457 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LDLRP01130 AC040958.1-201ENST00000561102 201 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.2□□□□□ -1.58
LDLRP01130 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.2□□□□□ -1.58
LDLRP01130 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 H3F3BP2-201ENST00000583907 357 ntBASIC5.2□□□□□ -1.58
LDLRP01130 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.2□□□□□ -1.58
LDLRP01130 AC108738.1-201ENST00000603703 237 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.2□□□□□ -1.58
LDLRP01130 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 AL139407.1-201ENST00000613826 1175 ntBASIC5.2□□□□□ -1.58
LDLRP01130 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 AL133370.2-201ENST00000619934 439 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.2□□□□□ -1.58
LDLRP01130 AC022919.1-201ENST00000624979 626 ntBASIC5.2□□□□□ -1.58
LDLRP01130 PWAR1-201ENST00000624188 2414 ntBASIC5.2□□□□□ -1.58
LDLRP01130 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
LDLRP01130 AL356317.1-201ENST00000396110 1436 ntBASIC5.2□□□□□ -1.58
LDLRP01130 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.2□□□□□ -1.58
LDLRP01130 SMG1P7-201ENST00000565246 2704 ntBASIC5.2□□□□□ -1.58
LDLRP01130 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.2□□□□□ -1.58
LDLRP01130 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.2□□□□□ -1.58
LDLRP01130 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 AC010266.2-201ENST00000564741 3255 ntBASIC5.2□□□□□ -1.58
LDLRP01130 AC019072.1-201ENST00000604535 1551 ntBASIC5.2□□□□□ -1.58
LDLRP01130 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LDLRP01130 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.2□□□□□ -1.58
LDLRP01130 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LDLRP01130 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 AC009501.3-201ENST00000605001 1352 ntBASIC5.19□□□□□ -1.58
LDLRP01130 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LDLRP01130 RN7SKP103-201ENST00000363848 320 ntBASIC5.19□□□□□ -1.58
LDLRP01130 GAPDHP15-201ENST00000398586 975 ntBASIC5.19□□□□□ -1.58
LDLRP01130 EI24P3-201ENST00000399046 1062 ntBASIC5.19□□□□□ -1.58
LDLRP01130 FABP12P1-201ENST00000401911 322 ntBASIC5.19□□□□□ -1.58
LDLRP01130 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.19□□□□□ -1.58
LDLRP01130 AL139128.1-201ENST00000413921 941 ntBASIC5.19□□□□□ -1.58
LDLRP01130 GNG5P5-201ENST00000420444 220 ntBASIC5.19□□□□□ -1.58
LDLRP01130 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.19□□□□□ -1.58
LDLRP01130 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.19□□□□□ -1.58
LDLRP01130 VN1R54P-201ENST00000435210 1049 ntBASIC5.19□□□□□ -1.58
LDLRP01130 MTND2P21-201ENST00000436242 1042 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms