Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HCN1O60741 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HCN1O60741 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HCN1O60741 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HCN1O60741 AL022393.1-201ENST00000625142 1677 ntBASIC4.84□□□□□ -1.63
HCN1O60741 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.84□□□□□ -1.63
HCN1O60741 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HCN1O60741 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HCN1O60741 SNORA17.1-201ENST00000362945 126 ntBASIC4.84□□□□□ -1.63
HCN1O60741 U3.2-201ENST00000362981 210 ntBASIC4.84□□□□□ -1.63
HCN1O60741 RNU1-43P-201ENST00000365052 165 ntBASIC4.84□□□□□ -1.63
HCN1O60741 UBBP2-201ENST00000376781 231 ntBASIC4.84□□□□□ -1.63
HCN1O60741 AL645927.1-201ENST00000396783 406 ntBASIC4.84□□□□□ -1.63
HCN1O60741 MIR1271-201ENST00000408537 86 ntBASIC4.84□□□□□ -1.63
HCN1O60741 AC007738.1-201ENST00000413892 348 ntBASIC4.84□□□□□ -1.63
HCN1O60741 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.84□□□□□ -1.63
HCN1O60741 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.84□□□□□ -1.63
HCN1O60741 RPS27P18-201ENST00000431701 247 ntBASIC4.84□□□□□ -1.63
HCN1O60741 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.84□□□□□ -1.63
HCN1O60741 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.84□□□□□ -1.63
HCN1O60741 CEACAMP7-201ENST00000444105 496 ntBASIC4.84□□□□□ -1.63
HCN1O60741 DNAJB5P1-201ENST00000454004 806 ntBASIC4.84□□□□□ -1.63
HCN1O60741 AC079168.1-201ENST00000458741 345 ntBASIC4.84□□□□□ -1.63
HCN1O60741 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.84□□□□□ -1.63
HCN1O60741 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HCN1O60741 CBX1P5-201ENST00000475330 559 ntBASIC4.84□□□□□ -1.63
HCN1O60741 RPSAP50-201ENST00000481955 852 ntBASIC4.84□□□□□ -1.63
HCN1O60741 RPL32P9-201ENST00000487963 407 ntBASIC4.84□□□□□ -1.63
HCN1O60741 RN7SL346P-201ENST00000491561 294 ntBASIC4.84□□□□□ -1.63
HCN1O60741 AC015864.1-201ENST00000496512 544 ntBASIC4.84□□□□□ -1.63
HCN1O60741 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.84□□□□□ -1.63
HCN1O60741 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.84□□□□□ -1.63
HCN1O60741 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.84□□□□□ -1.63
HCN1O60741 AP004607.2-201ENST00000533949 322 ntBASIC4.84□□□□□ -1.63
HCN1O60741 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.84□□□□□ -1.63
HCN1O60741 BNIP3P1-201ENST00000547295 580 ntBASIC4.84□□□□□ -1.63
HCN1O60741 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.84□□□□□ -1.63
HCN1O60741 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.84□□□□□ -1.63
HCN1O60741 AL121839.1-201ENST00000556233 1185 ntBASIC4.84□□□□□ -1.63
HCN1O60741 VN1R81P-201ENST00000602085 372 ntBASIC4.84□□□□□ -1.63
HCN1O60741 AC005252.1-201ENST00000604518 1063 ntBASIC4.84□□□□□ -1.63
HCN1O60741 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.84□□□□□ -1.63
HCN1O60741 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.84□□□□□ -1.63
HCN1O60741 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.84□□□□□ -1.63
HCN1O60741 AC068870.2-201ENST00000620635 389 ntBASIC4.84□□□□□ -1.63
HCN1O60741 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.84□□□□□ -1.63
HCN1O60741 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HCN1O60741 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HCN1O60741 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.84□□□□□ -1.63
HCN1O60741 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.84□□□□□ -1.63
HCN1O60741 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HCN1O60741 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
HCN1O60741 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 AC023421.1-201ENST00000590535 1785 ntBASIC4.83□□□□□ -1.64
HCN1O60741 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.83□□□□□ -1.64
HCN1O60741 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.83□□□□□ -1.64
HCN1O60741 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 BTBD10P1-201ENST00000549824 1352 ntBASIC4.83□□□□□ -1.64
HCN1O60741 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HCN1O60741 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HCN1O60741 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 U8.4-201ENST00000363626 134 ntBASIC4.83□□□□□ -1.64
HCN1O60741 SNORA58B-201ENST00000364259 136 ntBASIC4.83□□□□□ -1.64
HCN1O60741 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 DUTP5-201ENST00000406790 469 ntBASIC4.83□□□□□ -1.64
HCN1O60741 OR6C64P-201ENST00000419708 825 ntBASIC4.83□□□□□ -1.64
HCN1O60741 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.83□□□□□ -1.64
HCN1O60741 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HCN1O60741 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.83□□□□□ -1.64
HCN1O60741 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.83□□□□□ -1.64
HCN1O60741 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.83□□□□□ -1.64
HCN1O60741 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.83□□□□□ -1.64
HCN1O60741 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.83□□□□□ -1.64
HCN1O60741 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.83□□□□□ -1.64
HCN1O60741 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.83□□□□□ -1.64
HCN1O60741 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.83□□□□□ -1.64
HCN1O60741 RPS18P6-201ENST00000476880 458 ntBASIC4.83□□□□□ -1.64
HCN1O60741 RPL7P41-201ENST00000485823 957 ntBASIC4.83□□□□□ -1.64
HCN1O60741 RN7SL423P-201ENST00000486202 304 ntBASIC4.83□□□□□ -1.64
HCN1O60741 AC008953.1-201ENST00000497334 318 ntBASIC4.83□□□□□ -1.64
HCN1O60741 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.83□□□□□ -1.64
HCN1O60741 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HCN1O60741 AC025423.2-201ENST00000537570 439 ntBASIC4.83□□□□□ -1.64
HCN1O60741 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.83□□□□□ -1.64
HCN1O60741 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.83□□□□□ -1.64
HCN1O60741 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.83□□□□□ -1.64
HCN1O60741 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HCN1O60741 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.83□□□□□ -1.64
HCN1O60741 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.83□□□□□ -1.64
HCN1O60741 TAS2R6P-201ENST00000605022 826 ntBASIC4.83□□□□□ -1.64
HCN1O60741 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.83□□□□□ -1.64
HCN1O60741 CYP4F35P-202ENST00000636121 390 ntBASIC4.83□□□□□ -1.64
HCN1O60741 AC073869.10-201ENST00000642016 354 ntBASIC4.83□□□□□ -1.64
HCN1O60741 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.83□□□□□ -1.64
HCN1O60741 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms