Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL021918.2-201ENST00000613415 194 ntBASIC5.61□□□□□ -1.51
PROM1O43490 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
PROM1O43490 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.61□□□□□ -1.51
PROM1O43490 AC098679.4-201ENST00000624241 654 ntBASIC5.61□□□□□ -1.51
PROM1O43490 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PROM1O43490 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PROM1O43490 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.61□□□□□ -1.51
PROM1O43490 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.6□□□□□ -1.51
PROM1O43490 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.6□□□□□ -1.51
PROM1O43490 MFSD8-213ENST00000641134 1327 ntBASIC5.6□□□□□ -1.51
PROM1O43490 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PROM1O43490 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 U6.112-201ENST00000384129 70 ntBASIC5.6□□□□□ -1.51
PROM1O43490 SNORD116-1-201ENST00000384335 95 ntBASIC5.6□□□□□ -1.51
PROM1O43490 LYPLA1P3-201ENST00000402650 695 ntBASIC5.6□□□□□ -1.51
PROM1O43490 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 RPS4XP5-201ENST00000419038 768 ntBASIC5.6□□□□□ -1.51
PROM1O43490 RPS3AP37-201ENST00000419176 745 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.6□□□□□ -1.51
PROM1O43490 AC066692.1-201ENST00000421721 457 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.6□□□□□ -1.51
PROM1O43490 RPP40P1-201ENST00000426762 456 ntBASIC5.6□□□□□ -1.51
PROM1O43490 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.6□□□□□ -1.51
PROM1O43490 TUBB4BP6-201ENST00000437576 479 ntBASIC5.6□□□□□ -1.51
PROM1O43490 RPS12P17-201ENST00000438591 377 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AL663074.2-201ENST00000440621 479 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.6□□□□□ -1.51
PROM1O43490 AC073109.1-201ENST00000445066 978 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.6□□□□□ -1.51
PROM1O43490 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 NPM1P19-201ENST00000450070 712 ntBASIC5.6□□□□□ -1.51
PROM1O43490 ART2BP-201ENST00000453501 499 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.6□□□□□ -1.51
PROM1O43490 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.6□□□□□ -1.51
PROM1O43490 AC026414.1-201ENST00000504046 698 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AC021193.1-201ENST00000511607 420 ntBASIC5.6□□□□□ -1.51
PROM1O43490 RNA5SP340-201ENST00000517132 107 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.6□□□□□ -1.51
PROM1O43490 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.6□□□□□ -1.51
PROM1O43490 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
PROM1O43490 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.6□□□□□ -1.51
PROM1O43490 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.6□□□□□ -1.51
PROM1O43490 AC145423.1-201ENST00000605712 336 ntBASIC5.6□□□□□ -1.51
PROM1O43490 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 AC092106.3-201ENST00000611308 722 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AL445670.1-201ENST00000618889 801 ntBASIC5.6□□□□□ -1.51
PROM1O43490 AC006840.1-201ENST00000623069 542 ntBASIC5.6□□□□□ -1.51
PROM1O43490 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 AL161756.3-201ENST00000641216 2071 ntBASIC5.6□□□□□ -1.51
PROM1O43490 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
PROM1O43490 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PROM1O43490 AC079298.1-201ENST00000625026 1619 ntBASIC5.59□□□□□ -1.51
PROM1O43490 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.59□□□□□ -1.51
PROM1O43490 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.59□□□□□ -1.51
PROM1O43490 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 AC125336.1-201ENST00000508893 2827 ntBASIC5.59□□□□□ -1.51
PROM1O43490 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PROM1O43490 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.59□□□□□ -1.51
PROM1O43490 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 AC010132.2-201ENST00000295493 1043 ntBASIC5.59□□□□□ -1.51
PROM1O43490 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 RNA5SP453-201ENST00000362503 119 ntBASIC5.59□□□□□ -1.51
PROM1O43490 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 Y_RNA.578-201ENST00000390903 88 ntBASIC5.59□□□□□ -1.51
PROM1O43490 SNORA17A-201ENST00000391185 133 ntBASIC5.59□□□□□ -1.51
PROM1O43490 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PROM1O43490 XKRYP4-201ENST00000414395 483 ntBASIC5.59□□□□□ -1.51
PROM1O43490 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PROM1O43490 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.59□□□□□ -1.51
PROM1O43490 PNRC2P1-201ENST00000423940 420 ntBASIC5.59□□□□□ -1.51
PROM1O43490 AC084290.1-201ENST00000434995 374 ntBASIC5.59□□□□□ -1.51
PROM1O43490 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms