Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA3O43365 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA3O43365 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA3O43365 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA3O43365 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA3O43365 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA3O43365 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA3O43365 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA3O43365 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA3O43365 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA3O43365 AL121950.1-201ENST00000624993 2077 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 SNORA62.2-201ENST00000364672 152 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 RNY3P10-201ENST00000384764 102 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 MIR217-201ENST00000384817 110 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 YWHAZP6-201ENST00000399764 738 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 RNA5SP431-201ENST00000410312 120 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 RN7SKP271-201ENST00000410528 320 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 AC099782.1-201ENST00000425889 474 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 Z93242.1-201ENST00000427102 353 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC115283.1-201ENST00000427353 400 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 MRPS10P2-201ENST00000431226 381 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 RPS10P18-201ENST00000442662 495 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 RPL23AP35-201ENST00000451906 501 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 HSD3BP3-201ENST00000514706 994 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXA3O43365 HMGB1P23-201ENST00000518743 568 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 AP001207.1-201ENST00000524051 481 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 OR5D2P-201ENST00000524390 911 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA3O43365 OR7K1P-201ENST00000546439 926 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 AL845552.1-201ENST00000556820 323 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AL133241.1-201ENST00000556832 487 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC136619.2-201ENST00000563361 631 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 AP003115.1-201ENST00000569849 463 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 RN7SL208P-201ENST00000577964 296 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 MIR4502-201ENST00000580432 81 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 DYNLL1P1-201ENST00000595442 269 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 VN1R92P-201ENST00000598511 928 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC079315.1-201ENST00000602952 623 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 SMIM12P1-201ENST00000603004 274 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC004805.3-201ENST00000603178 310 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC067959.1-201ENST00000604334 379 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC068276.1-201ENST00000605793 379 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC090186.1-201ENST00000605991 572 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AP001596.2-201ENST00000608410 312 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC012360.2-201ENST00000609349 391 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AL135999.3-201ENST00000610501 812 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 AC010333.3-201ENST00000615100 402 ntBASIC5.28□□□□□ -1.56
HOXA3O43365 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXA3O43365 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA3O43365 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA3O43365 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA3O43365 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms