Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 RPS4XP18-201ENST00000495480 763 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 HMGB1P42-201ENST00000532126 553 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 AC091305.2-201ENST00000624049 1576 ntBASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
RBFOX3A6NFN3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.77
RBFOX3A6NFN3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RBFOX3A6NFN3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 YES1P1-201ENST00000418510 1628 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 EOGT-210ENST00000615922 1931 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 SUGT1P2-201ENST00000379452 992 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 SNORA16A-201ENST00000384342 137 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 LAP3P1-201ENST00000403648 294 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 Z93019.1-201ENST00000416450 973 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 GAPDHP25-201ENST00000447061 1001 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 RPL7P40-201ENST00000481703 745 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 NIP7P2-201ENST00000485801 544 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AC104971.1-201ENST00000495117 578 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AC107918.3-201ENST00000533272 382 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 YWHABP2-201ENST00000540201 713 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 FAM106CP-201ENST00000582212 507 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AL008729.2-201ENST00000606393 473 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AP003499.2-201ENST00000624100 483 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AC017104.4-201ENST00000636283 1592 ntBASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RBFOX3A6NFN3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 RNU1-108P-201ENST00000362556 161 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 Y_RNA.62-201ENST00000362840 99 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 RNU6-697P-201ENST00000363348 107 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 RN7SKP275-201ENST00000364626 301 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 RNA5SP510-201ENST00000364697 99 ntBASIC3.95□□□□□ -1.78
RBFOX3A6NFN3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms