Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MIR4660-201ENST00000583549 74 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AP005131.7-201ENST00000610087 611 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 RMST_5.1-201ENST00000618704 126 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AL133370.2-201ENST00000619934 439 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 MIR6719-201ENST00000622428 87 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AC135068.12-201ENST00000637370 931 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 AL121950.1-201ENST00000624993 2077 ntBASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4BQ9Y4P1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AC110792.3-201ENST00000595906 1614 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AC002525.1-201ENST00000624392 1622 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 MIR600-201ENST00000385007 98 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 MIR105-2-201ENST00000385083 81 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 NUDT19P3-201ENST00000404698 555 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 GLUD1P9-201ENST00000420997 1173 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 MTCO1P45-201ENST00000431457 267 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 TXNP2-201ENST00000443918 295 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 BX842559.2-201ENST00000451418 605 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 PRPF38AP1-201ENST00000451976 933 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 HSPE1P22-201ENST00000456856 327 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 GTF2F2P1-201ENST00000511083 675 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AC125612.1-201ENST00000547580 377 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AL359219.2-201ENST00000555184 348 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AC051619.2-201ENST00000559063 397 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AC006272.2-201ENST00000594725 163 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AC126915.2-201ENST00000610957 190 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AC107308.1-201ENST00000615897 301 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 AP002505.2-201ENST00000623585 696 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 SAMMSON-227ENST00000642114 1199 ntBASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG4BQ9Y4P1 Z95331.1-201ENST00000623075 23112 ntBASIC4.9□□□□□ -1.62
ATG4BQ9Y4P1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4BQ9Y4P1 SPATA2P1-201ENST00000431223 2055 ntBASIC4.9□□□□□ -1.62
ATG4BQ9Y4P1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4BQ9Y4P1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4BQ9Y4P1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ATG4BQ9Y4P1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.9□□□□□ -1.62
ATG4BQ9Y4P1 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.9□□□□□ -1.62
ATG4BQ9Y4P1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
ATG4BQ9Y4P1 RNU4-7P-201ENST00000364758 141 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 ST13P16-201ENST00000401760 781 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 DUTP5-201ENST00000406790 469 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 MIR1182-201ENST00000408363 97 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 DPPA2P3-201ENST00000411853 655 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 COX5BP7-201ENST00000414780 274 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AL512504.1-201ENST00000415494 778 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 BUD31P2-201ENST00000449374 300 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AURKAPS1-201ENST00000451805 1212 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC009127.1-201ENST00000467090 155 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC005532.2-201ENST00000467154 373 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 RN7SL222P-201ENST00000476452 299 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC093763.2-201ENST00000505334 1223 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 RNU6-513P-201ENST00000516104 104 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 OR4A46P-201ENST00000527255 933 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 OR10G5P-201ENST00000532733 358 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 HAUS8P1-201ENST00000549005 542 ntBASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4BQ9Y4P1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms