Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 RPL10P14-201ENST00000565265 298 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC007204.2-201ENST00000615022 616 ntBASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RHBDD3Q9Y3P4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
RHBDD3Q9Y3P4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AL022393.1-201ENST00000625142 1677 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC010132.2-201ENST00000295493 1043 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 RNA5SP339-201ENST00000390987 122 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC093719.1-202ENST00000392735 373 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC009804.1-201ENST00000400949 179 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 CLUHP1-201ENST00000435012 1190 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC069277.2-201ENST00000454211 432 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 RN7SL189P-201ENST00000468631 289 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC008410.1-201ENST00000483777 339 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 RPL7P51-201ENST00000490532 749 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC069304.1-201ENST00000491593 704 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AL133372.1-201ENST00000493565 745 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 RNU6-319P-201ENST00000516025 108 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 RNU6-941P-201ENST00000516346 108 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 HNRNPRP2-201ENST00000528421 743 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC006349.1-201ENST00000555526 235 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 RN7SL708P-201ENST00000580952 299 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 SNX6P1-201ENST00000601728 1224 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 GMCL1P2-201ENST00000605230 823 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC007620.3-201ENST00000608131 497 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC019131.2-201ENST00000609071 870 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 BX005214.3-202ENST00000619809 325 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC074101.1-201ENST00000637861 241 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 AC063976.2-201ENST00000425667 3556 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 ASNSP1-201ENST00000518311 1939 ntBASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RHBDD3Q9Y3P4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 OR55B1P-203ENST00000641518 2602 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC090017.1-201ENST00000548612 1779 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 RNU1-149P-201ENST00000390870 161 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC073136.2-201ENST00000417282 849 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 FAM96AP1-201ENST00000430879 482 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 CYCSP24-201ENST00000445119 316 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 CLIC4P1-201ENST00000453177 535 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AL354710.1-201ENST00000453641 246 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC007386.1-201ENST00000455212 582 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AL133445.1-201ENST00000467051 452 ntBASIC4.51□□□□□ -1.69
RHBDD3Q9Y3P4 AC005412.2-201ENST00000492004 341 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms