Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
VPS9D1Q9Y2B5 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 U3.12-201ENST00000364498 214 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 Y_RNA.461-201ENST00000384263 103 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 SNORD116-23-201ENST00000384645 92 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 PPIAP2-201ENST00000414143 492 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC114814.2-201ENST00000419195 485 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 HSPE1P16-201ENST00000426640 348 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 HSD3BP5-201ENST00000434856 1132 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 RPL7P29-201ENST00000437151 728 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 TMSB4XP3-201ENST00000445144 114 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC079781.2-201ENST00000446424 169 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 GAPDHP14-201ENST00000450472 937 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC092569.1-201ENST00000455192 258 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC110749.1-201ENST00000462007 357 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 RN7SL395P-201ENST00000462960 291 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 RPS12P20-201ENST00000464109 380 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 RPL7P5-201ENST00000471472 736 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC008638.1-201ENST00000506035 866 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 Y_RNA.703-201ENST00000516846 111 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-1213P-201ENST00000517075 94 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 SNORA81.3-201ENST00000517283 198 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 SUMO2P20-201ENST00000520803 283 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC022616.3-201ENST00000523940 148 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AL355297.3-201ENST00000604082 446 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AL669831.3-213ENST00000636676 183 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AL049780.3-201ENST00000624612 1583 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC026464.2-201ENST00000567834 2421 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 AC092718.7-201ENST00000623577 1776 ntBASIC7.87□□□□□ -1.15
VPS9D1Q9Y2B5 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AL138847.1-201ENST00000258651 546 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-38P-201ENST00000384085 107 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-1081P-201ENST00000384537 107 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 SAR1AP2-201ENST00000392696 594 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AL590806.1-201ENST00000415818 853 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AC006548.1-201ENST00000427470 102 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AL132765.1-201ENST00000434165 553 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 PRPS1P1-201ENST00000445305 876 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 TRGVB-201ENST00000453257 471 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RNU6-333P-201ENST00000459117 107 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RPSAP24-201ENST00000461543 873 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RPL12P40-201ENST00000467028 488 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 AC006512.1-201ENST00000468816 291 ntBASIC7.86□□□□□ -1.15
VPS9D1Q9Y2B5 RN7SL223P-201ENST00000470401 294 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms