Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC235565.1-201ENST00000456962 1325 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 OR51C1P-202ENST00000641159 1444 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AL590763.1-201ENST00000398297 1545 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AL390316.1-201ENST00000406279 553 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 CYCSP10-201ENST00000417973 294 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 TMBIM7P-201ENST00000418074 855 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 E2F6P2-201ENST00000420708 748 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AL355433.1-201ENST00000422804 300 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AL355994.1-201ENST00000424379 260 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 COX6CP13-201ENST00000428703 226 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AL163193.1-201ENST00000444895 788 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 KNOP1P3-201ENST00000446933 426 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC004980.3-201ENST00000447046 365 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 UBA52P7-201ENST00000486088 380 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 RNA5SP249-201ENST00000516127 99 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC022832.1-201ENST00000530718 645 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AGGF1P9-201ENST00000561884 913 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC108359.1-201ENST00000616451 1211 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC087821.1-201ENST00000623639 567 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC138627.1-204ENST00000641894 765 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 DHX9P1-201ENST00000436565 3076 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 Z95331.1-201ENST00000623075 23112 ntBASIC4.63□□□□□ -1.67
TRAPPC4Q9Y296 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 CR788268.1-201ENST00000603931 1809 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 RNU4-44P-201ENST00000363050 141 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 RN7SKP126-201ENST00000411143 300 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 RPL7AP61-201ENST00000443410 636 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 FAR2P1-206ENST00000449736 709 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AL356981.1-201ENST00000454879 684 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 GYG1P1-201ENST00000460864 698 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AC108161.1-201ENST00000461060 402 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 RN7SL443P-201ENST00000464331 290 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 RPS26P39-201ENST00000469206 341 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AC108751.2-201ENST00000469993 231 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AC097484.1-201ENST00000471148 389 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 RN7SL441P-201ENST00000492388 296 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 HIGD1AP14-201ENST00000507617 282 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 RFPL4AP5-201ENST00000514977 504 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 RNA5SP34-201ENST00000516887 130 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AP002505.2-201ENST00000623585 696 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms