Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL022394.1-201ENST00000606979 292 ntBASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 AC135803.1-201ENST00000608748 565 ntBASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 AL445528.2-201ENST00000620582 470 ntBASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 AC099654.6-201ENST00000636487 512 ntBASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 AL034549.2-201ENST00000618285 3373 ntBASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
HDAC6Q9UBN7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.96□□□□□ -1.45
HDAC6Q9UBN7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HDAC6Q9UBN7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HDAC6Q9UBN7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
HDAC6Q9UBN7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HDAC6Q9UBN7 AL078621.3-201ENST00000623707 2042 ntBASIC5.96□□□□□ -1.45
HDAC6Q9UBN7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HDAC6Q9UBN7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AL139128.1-201ENST00000413921 941 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AL136231.1-201ENST00000429407 730 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 RPL7P56-201ENST00000429441 717 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 RBMY2QP-201ENST00000429799 1147 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC092647.3-201ENST00000443044 633 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 Z80107.2-201ENST00000445127 392 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 MTND2P25-201ENST00000449028 610 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC013701.1-201ENST00000522657 465 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC019227.1-201ENST00000526902 510 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 YWHABP2-201ENST00000540201 713 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC011840.5-201ENST00000582125 771 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 MIR4660-201ENST00000583549 74 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AL512506.1-201ENST00000613918 449 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC100827.5-201ENST00000615883 426 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC097372.4-201ENST00000625025 466 ntBASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HDAC6Q9UBN7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC092376.2-201ENST00000622621 4116 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 RN7SKP115-201ENST00000363177 317 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 RN7SKP103-201ENST00000363848 320 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 ST13P16-201ENST00000401760 781 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 SEPT7P8-201ENST00000413308 775 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 RIMKLBP2-201ENST00000424737 654 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 SEC63P1-201ENST00000425785 1258 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC023141.6-201ENST00000429418 337 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC073465.2-201ENST00000440938 498 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 RAB28P3-201ENST00000448325 597 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 GAPDHP14-201ENST00000450472 937 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC092754.1-201ENST00000472975 479 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 STRADBP1-201ENST00000478954 1281 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 MTND3P3-201ENST00000505004 126 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC025768.1-201ENST00000510057 267 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC021193.1-201ENST00000511607 420 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AP001922.4-201ENST00000526967 290 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC024940.3-201ENST00000538551 316 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC092490.3-201ENST00000545370 572 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC099494.2-201ENST00000623371 978 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 FRG1EP-201ENST00000634469 770 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 AC073136.1-201ENST00000449426 2884 ntBASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC6Q9UBN7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms