Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC010350.1-201ENST00000504908 231 ntBASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 BRD9P1-201ENST00000529855 560 ntBASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 AC008033.2-201ENST00000542626 177 ntBASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 EDDM3DP-201ENST00000554692 434 ntBASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 MIR4700-201ENST00000578311 74 ntBASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 MIR3934-201ENST00000579806 107 ntBASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 SCARNA15-201ENST00000607520 4325 ntBASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCF1Q9UBD9 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 THAP12P8-201ENST00000447914 2115 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 SNORA77-201ENST00000408716 125 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AL139128.1-201ENST00000413921 941 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 COX6B1P1-201ENST00000415962 213 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AL772161.1-201ENST00000439130 476 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AC073648.4-201ENST00000442655 781 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 RPL31P44-201ENST00000447680 377 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 TCEA1P1-201ENST00000449716 880 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 RPS3AP53-201ENST00000454716 778 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AC083982.1-201ENST00000485679 344 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 RN7SL591P-201ENST00000496150 292 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AC087783.2-201ENST00000605070 562 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 RNU6-84P-201ENST00000607737 102 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 CUL4AP1-201ENST00000514750 1863 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 MTCO1P22-201ENST00000604619 1360 ntBASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLCF1Q9UBD9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 MIR585-201ENST00000384887 94 ntBASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 EI24P3-201ENST00000399046 1062 ntBASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 AC079809.1-201ENST00000415468 276 ntBASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 RPS29P9-201ENST00000440360 171 ntBASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 AL137845.2-201ENST00000444292 988 ntBASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 RPL7P16-201ENST00000479738 738 ntBASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.5□□□□□ -1.69
CLCF1Q9UBD9 AC021006.3-201ENST00000530771 192 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms