Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HMGB1P26-201ENST00000452520 628 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 RN7SL610P-201ENST00000463845 291 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC098583.1-201ENST00000480875 255 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 RPL21P47-201ENST00000483696 477 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 PPP1R11P1-201ENST00000486095 376 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC111000.6-201ENST00000514471 709 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 MTCYBP19-201ENST00000517463 1124 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 OR7E13P-201ENST00000526052 910 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AP003066.2-201ENST00000529375 555 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC022832.1-201ENST00000530718 645 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 OR4A43P-201ENST00000532938 908 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC104229.1-201ENST00000561364 255 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 RN7SL708P-201ENST00000580952 299 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 FAM106CP-201ENST00000582212 507 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC008507.2-201ENST00000588402 1176 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC004948.1-201ENST00000609858 672 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC124016.2-201ENST00000610058 665 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AL158062.1-201ENST00000619632 745 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC074101.1-201ENST00000637861 241 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC003973.3-201ENST00000624863 2822 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL20A1Q9P218 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC004076.2-201ENST00000620532 3323 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.08□□□□□ -1.44
COL20A1Q9P218 AC114774.1-201ENST00000507410 1770 ntBASIC6.08□□□□□ -1.44
COL20A1Q9P218 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL20A1Q9P218 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 HSPD1P14-201ENST00000432666 1618 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC015799.1-201ENST00000622996 3122 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 RNU6-252P-201ENST00000363232 107 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 U3.36-201ENST00000408418 213 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 EI24P4-201ENST00000423683 1078 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 CLUHP1-201ENST00000435012 1190 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC073465.2-201ENST00000440938 498 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC009127.1-201ENST00000467090 155 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC090114.3-201ENST00000479267 829 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 RN7SL423P-201ENST00000486202 304 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 HAUS1P1-201ENST00000505275 832 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC108120.2-201ENST00000512973 294 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC010376.1-201ENST00000522101 334 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC084824.2-201ENST00000548906 345 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AGGF1P9-201ENST00000561884 913 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC091057.3-201ENST00000602684 733 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC023762.1-201ENST00000603280 584 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC087763.1-201ENST00000603391 286 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC018754.1-201ENST00000607486 925 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC133644.2-201ENST00000608142 540 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC068870.2-201ENST00000620635 389 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 RPL23AP61-201ENST00000623642 466 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC126544.2-201ENST00000625174 749 ntBASIC6.07□□□□□ -1.44
COL20A1Q9P218 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL20A1Q9P218 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.07□□□□□ -1.44
COL20A1Q9P218 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL20A1Q9P218 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL20A1Q9P218 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL20A1Q9P218 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL20A1Q9P218 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 RNU6-468P-201ENST00000384003 109 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms