Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SNORA35B-201ENST00000607417 129 ntBASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNB1IP1Q9NPC3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 RNA5SP435-201ENST00000364044 108 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 RNA5SP242-201ENST00000364171 118 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 RPL5P19-201ENST00000404228 893 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AL133388.1-201ENST00000404509 287 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 RN7SKP247-201ENST00000411094 308 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 OR13Z1P-201ENST00000416141 834 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AL139148.1-201ENST00000427122 680 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 COX6CP13-201ENST00000428703 226 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 FABP7P2-201ENST00000429946 379 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 CLUHP1-201ENST00000435012 1190 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 MTND4LP12-201ENST00000448237 295 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 RANP1-206ENST00000455094 651 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC023141.9-201ENST00000458734 412 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 RPL35AP19-201ENST00000469425 329 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC022795.1-201ENST00000473808 480 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 RPL7P40-201ENST00000481703 745 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 RN7SL423P-201ENST00000486202 304 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC005412.2-201ENST00000492004 341 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 TCP11X3P-202ENST00000514289 1254 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 HMGB1P19-201ENST00000517578 577 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 IGLVIV-64-201ENST00000518581 301 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC000068.2-201ENST00000608816 460 ntBASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNB1IP1Q9NPC3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCNB1IP1Q9NPC3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCNB1IP1Q9NPC3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CCNB1IP1Q9NPC3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCNB1IP1Q9NPC3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 SNORA16A-201ENST00000384342 137 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 MIR105-1-201ENST00000385222 81 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 MIR143-201ENST00000385300 106 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 SNORA68.2-201ENST00000391263 128 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AC104297.1-201ENST00000393779 870 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 CYCSP6-201ENST00000434498 302 ntBASIC4.71□□□□□ -1.66
CCNB1IP1Q9NPC3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms