Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL121835.1-201ENST00000404250 354 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AL590002.1-201ENST00000406554 418 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 RN7SKP56-201ENST00000410513 331 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 RN7SKP59-201ENST00000410520 314 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AL590806.1-201ENST00000415818 853 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 RPL21P32-201ENST00000419877 477 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC007562.1-201ENST00000421819 517 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 SPATA20P1-201ENST00000423089 438 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AL139158.1-201ENST00000424719 340 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 MTCO2P11-201ENST00000431069 680 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 SEPT7P5-201ENST00000434048 306 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC092427.1-201ENST00000439177 601 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC023274.2-201ENST00000445264 521 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 Z99127.3-201ENST00000448158 395 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 RPL7AP71-201ENST00000451120 739 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 RPL26P30-201ENST00000453533 435 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 MTCO3P11-201ENST00000455103 774 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 KLF3P2-201ENST00000465138 268 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AL928654.1-201ENST00000476081 354 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 RPL7AP56-201ENST00000476420 791 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC079080.1-201ENST00000479841 822 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 DYNLL1P6-201ENST00000503440 264 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC022483.1-201ENST00000514020 567 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AP002383.5-201ENST00000542623 1161 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC005730.3-201ENST00000583067 366 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 CARSP1-201ENST00000603171 889 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AP000860.1-201ENST00000605250 559 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC126177.8-201ENST00000618339 1015 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AL445670.1-201ENST00000618889 801 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC092646.2-201ENST00000431242 2095 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 BIN2P1-201ENST00000504996 1530 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC135352.1-201ENST00000506173 1418 ntBASIC6.49□□□□□ -1.37
SSU72Q9NP77 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSU72Q9NP77 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.49□□□□□ -1.37
SSU72Q9NP77 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC092326.2-201ENST00000624772 1561 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 RNU6-297P-201ENST00000384636 107 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC007066.1-201ENST00000392902 381 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC023141.1-201ENST00000419418 379 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 PPIL1P1-201ENST00000423936 499 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC104843.2-201ENST00000427666 297 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 FAM96AP1-201ENST00000430879 482 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 RPSAP40-201ENST00000442343 891 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 PFN1P11-201ENST00000445829 389 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms