Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NXF3Q9H4D5 CDY11P-201ENST00000447168 1651 ntBASIC5.36□□□□□ -1.55
NXF3Q9H4D5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NXF3Q9H4D5 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.36□□□□□ -1.55
NXF3Q9H4D5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NXF3Q9H4D5 MAPK10-338ENST00000641647 3362 ntBASIC5.36□□□□□ -1.55
NXF3Q9H4D5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AP005432.1-201ENST00000580891 3485 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 SDAD1P1-202ENST00000524156 2051 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC012618.3-205ENST00000637896 1496 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC007618.1-201ENST00000366455 732 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AL357515.1-201ENST00000402967 542 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 TBCAP2-201ENST00000416175 326 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC019050.1-201ENST00000418508 492 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AL136231.1-201ENST00000429407 730 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 SCAND3P1-201ENST00000439854 1060 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 RPL36AP15-201ENST00000444514 266 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AURKAPS2-201ENST00000454983 333 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 CR383656.6-201ENST00000550518 394 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 MIR4330-201ENST00000579077 105 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC091042.1-201ENST00000579213 173 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AL391358.1-201ENST00000605342 190 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AL161616.1-201ENST00000611867 286 ntBASIC5.35□□□□□ -1.55
NXF3Q9H4D5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.35□□□□□ -1.55
NXF3Q9H4D5 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 RNA5SP443-201ENST00000363083 132 ntBASIC5.34□□□□□ -1.55
NXF3Q9H4D5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 RN7SKP100-201ENST00000411258 284 ntBASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 SLC25A18P1-201ENST00000449385 454 ntBASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC234781.3-201ENST00000452540 973 ntBASIC5.34□□□□□ -1.55
NXF3Q9H4D5 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AP001880.2-201ENST00000538233 448 ntBASIC5.34□□□□□ -1.55
NXF3Q9H4D5 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AL512782.1-201ENST00000603093 364 ntBASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC018695.5-201ENST00000605872 315 ntBASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AL049794.2-201ENST00000616301 365 ntBASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 AC004817.4-201ENST00000602396 3625 ntBASIC5.34□□□□□ -1.55
NXF3Q9H4D5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
NXF3Q9H4D5 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.34□□□□□ -1.56
NXF3Q9H4D5 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NXF3Q9H4D5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.34□□□□□ -1.56
NXF3Q9H4D5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NXF3Q9H4D5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NXF3Q9H4D5 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms