Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 SNORA66-201ENST00000384792 133 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 EI24P3-201ENST00000399046 1062 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 RN7SKP213-201ENST00000410746 298 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AC002524.1-201ENST00000411687 547 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 ARAFP2-201ENST00000440565 559 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AP001960.1-201ENST00000506494 658 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AP002981.1-201ENST00000517692 975 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 HNRNPRP2-201ENST00000528421 743 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AC006116.3-201ENST00000592968 361 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AC104687.2-201ENST00000604442 342 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 AC068870.2-201ENST00000620635 389 ntBASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCSER1Q9C0I3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 SNORA70-201ENST00000384436 135 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 SNORA70.10-201ENST00000384515 134 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 AL645927.1-201ENST00000396783 406 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 RPL10P10-201ENST00000403509 664 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 AC096644.3-201ENST00000416788 338 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 VN1R31P-201ENST00000417498 730 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 RHOT1P3-201ENST00000436571 331 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 PTMAP6-201ENST00000439110 327 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 GTF3AP5-201ENST00000442645 697 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 RN7SL329P-201ENST00000467740 299 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 AC008410.1-201ENST00000483777 339 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 RN7SL244P-201ENST00000493405 297 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 EIF4A2P5-201ENST00000529914 499 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 AL138820.1-201ENST00000617901 5305 ntBASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCSER1Q9C0I3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 ECM1P2-201ENST00000503354 1577 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 RNA5SP305-201ENST00000362665 119 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 SNORA73.1-201ENST00000363107 205 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 SNORA58B-201ENST00000364259 136 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 OR6C71P-201ENST00000432580 913 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 SCAND3P1-201ENST00000439854 1060 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC239798.3-201ENST00000454459 408 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 RN7SL517P-201ENST00000462240 305 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 RPS18P6-201ENST00000476880 458 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 RPSAP50-201ENST00000481955 852 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC109462.1-201ENST00000491087 368 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AL133372.1-201ENST00000493565 745 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 OR5M14P-201ENST00000506803 618 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 ENPP7P9-201ENST00000514456 627 ntBASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.6□□□□□ -1.51
CCSER1Q9C0I3 AC092490.3-201ENST00000545370 572 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms