Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC007738.1-201ENST00000413892 348 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 TRGV5P-201ENST00000419915 354 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 HSPE1P27-201ENST00000430808 296 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC004980.3-201ENST00000447046 365 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 HMGB1P4-201ENST00000455362 567 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 RPS17P2-201ENST00000461663 408 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 RN7SL441P-201ENST00000492388 296 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 USP9YP2-201ENST00000504503 1000 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 USP9YP1-201ENST00000513521 1002 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 HNRNPRP2-201ENST00000528421 743 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC005868.1-201ENST00000536421 331 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AP002373.2-201ENST00000541631 1060 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC116553.2-201ENST00000564203 463 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AL445528.2-201ENST00000620582 470 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AL603750.1-201ENST00000624216 1717 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC068446.1-201ENST00000556425 1549 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 SNORA17.1-201ENST00000362945 126 ntBASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 RPS26P13-201ENST00000419030 330 ntBASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 RPS29P9-201ENST00000440360 171 ntBASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AC073052.1-201ENST00000440417 714 ntBASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AC012512.1-201ENST00000446594 718 ntBASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 TCEA1P1-201ENST00000449716 880 ntBASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AC093166.2-201ENST00000455969 1017 ntBASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 MIR4330-201ENST00000579077 105 ntBASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 AL356317.1-201ENST00000396110 1436 ntBASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UPF3BQ9BZI7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AC017079.1-201ENST00000333650 415 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AL121878.1-201ENST00000418638 859 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AL049745.1-201ENST00000433953 286 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 RPL34P20-201ENST00000442771 351 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AL161722.1-201ENST00000446972 1032 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 IGHV5-78-201ENST00000450948 295 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AC009963.2-201ENST00000453431 138 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 SNRPCP2-201ENST00000504370 475 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AC095055.1-201ENST00000603472 1113 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AC105254.2-201ENST00000603636 436 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AP000346.3-201ENST00000622821 210 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 AC008079.2-201ENST00000623543 20396 ntBASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
UPF3BQ9BZI7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms