Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC012213.3-201ENST00000577199 777 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC012360.2-201ENST00000609349 391 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC135068.5-201ENST00000624197 983 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC006927.3-201ENST00000638789 384 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AL354702.2-202ENST00000641481 890 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC107081.3-201ENST00000612715 2034 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 RNA5SP88-201ENST00000365560 109 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 RPL23AP29-201ENST00000397284 453 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC113412.1-201ENST00000425840 504 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC092427.1-201ENST00000439177 601 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC023271.1-201ENST00000445936 1090 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC239809.1-201ENST00000450470 217 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 HMGB1P7-201ENST00000450921 612 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 OR6C5P-201ENST00000452388 923 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 RNU6-956P-201ENST00000458868 103 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AL024509.2-201ENST00000493462 493 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC091849.1-201ENST00000509920 121 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 MTCYBP43-201ENST00000513621 740 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 RNA5SP116-201ENST00000516132 98 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC090502.2-201ENST00000549267 280 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC019257.2-201ENST00000605539 497 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC007204.2-201ENST00000615022 616 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC123768.4-201ENST00000616244 701 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AL121890.2-201ENST00000617644 465 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC026585.1-201ENST00000619582 524 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AL356121.2-201ENST00000624715 780 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 AC087565.3-203ENST00000641018 837 ntBASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRAIPQ9BWF2 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 AL079343.1-201ENST00000572358 1771 ntBASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRAIPQ9BWF2 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms