Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX3Q99909 AC087190.4-201ENST00000574616 8334 ntBASIC4.67□□□□□ -1.66
SSX3Q99909 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 MTND4P21-201ENST00000453886 1357 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AC009501.3-201ENST00000605001 1352 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SSX3Q99909 RNA5SP242-201ENST00000364171 118 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 RANP4-201ENST00000413361 655 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX3Q99909 AL133482.1-201ENST00000415988 498 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AC093155.2-201ENST00000420734 937 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX3Q99909 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 AC242426.1-201ENST00000435270 960 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 SUMO2P3-201ENST00000438311 288 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 MTND2P25-201ENST00000449028 610 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX3Q99909 FRG2FP-204ENST00000453982 852 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 PPIAP21-201ENST00000464473 501 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AL157777.1-201ENST00000468100 304 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 OR9N1P-202ENST00000494289 481 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX3Q99909 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 GAPDHP62-201ENST00000515313 990 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 SNORA43.3-201ENST00000517240 103 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX3Q99909 AC022882.1-201ENST00000532142 501 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AC008083.2-201ENST00000546707 476 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AC022404.1-201ENST00000555320 273 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AC090312.1-201ENST00000580637 348 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 AC040174.2-201ENST00000602701 465 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AL133481.2-203ENST00000607558 139 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 CR589904.2-201ENST00000612533 440 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 MIR6133-201ENST00000617057 108 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AL356490.1-201ENST00000623079 479 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AL390318.1-201ENST00000624564 687 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.66□□□□□ -1.66
SSX3Q99909 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 AL731566.1-201ENST00000620490 1937 ntBASIC4.66□□□□□ -1.66
SSX3Q99909 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
SSX3Q99909 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.66□□□□□ -1.66
SSX3Q99909 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SSX3Q99909 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSX3Q99909 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.65□□□□□ -1.66
SSX3Q99909 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
SSX3Q99909 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSX3Q99909 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
SSX3Q99909 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.65□□□□□ -1.66
SSX3Q99909 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SSX3Q99909 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.65□□□□□ -1.66
SSX3Q99909 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SSX3Q99909 RNA5SP46-201ENST00000362370 120 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 SNORA70.6-201ENST00000383934 134 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 RMRPP5-201ENST00000411156 267 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 RN7SKP293-201ENST00000411389 296 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AL513325.1-201ENST00000417716 1034 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 RNGTTP1-201ENST00000420965 728 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AC073464.3-201ENST00000422564 712 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 RPL12P28-201ENST00000430852 489 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms