Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SNORD113.2-201ENST00000364166 89 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 RNU2-50P-201ENST00000410494 143 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 STRADBP1-201ENST00000478954 1281 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 AC097486.1-201ENST00000515331 210 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 CYCSP40-201ENST00000575927 294 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 AL161616.1-201ENST00000611867 286 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 RNA5SP439-201ENST00000617595 124 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 AC012414.7-202ENST00000622705 1090 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 AC004232.3-201ENST00000622977 525 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 AC007998.4-201ENST00000612496 2533 ntBASIC5.7□□□□□ -1.5
CDK5RAP2Q96SN8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 SNORA5.1-201ENST00000384275 131 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AC009480.2-201ENST00000422916 432 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 OR5M12P-201ENST00000423388 929 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 CBX1P1-201ENST00000440184 427 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 RNU1-6P-201ENST00000516290 144 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AP006289.1-201ENST00000538089 277 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AC008147.3-201ENST00000548666 354 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 MIR6853-201ENST00000619642 74 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 KARSP3-201ENST00000571212 1504 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AC139713.2-214ENST00000642059 1811 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AL034370.1-201ENST00000397254 1590 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP2Q96SN8 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 CKS1BP6-201ENST00000424932 240 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC022726.1-201ENST00000587475 207 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 MIR133A2-201ENST00000347538 102 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 RN7SKP267-201ENST00000410381 285 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC007738.1-201ENST00000413892 348 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 YWHAZP2-201ENST00000440317 728 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 RPS23P7-201ENST00000466210 444 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC104763.1-201ENST00000475274 360 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AL049830.4-201ENST00000555149 351 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AL356317.1-201ENST00000396110 1436 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AC135352.1-201ENST00000506173 1418 ntBASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP2Q96SN8 AL121950.1-201ENST00000624993 2077 ntBASIC5.67□□□□□ -1.5
CDK5RAP2Q96SN8 AC109446.4-201ENST00000623235 2755 ntBASIC5.67□□□□□ -1.5
CDK5RAP2Q96SN8 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP2Q96SN8 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDK5RAP2Q96SN8 AP000580.1-201ENST00000404439 358 ntBASIC5.67□□□□□ -1.5
CDK5RAP2Q96SN8 RPS4XP9-201ENST00000405151 780 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 600.4 ms