Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8□□□□□ -1.13
IFT140Q96RY7 MIR7853-201ENST00000584820 132 ntBASIC8□□□□□ -1.13
IFT140Q96RY7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC8□□□□□ -1.13
IFT140Q96RY7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC8□□□□□ -1.13
IFT140Q96RY7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
IFT140Q96RY7 AC090220.1-201ENST00000593078 1699 ntBASIC8□□□□□ -1.13
IFT140Q96RY7 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
IFT140Q96RY7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC8□□□□□ -1.13
IFT140Q96RY7 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8□□□□□ -1.13
IFT140Q96RY7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC8□□□□□ -1.13
IFT140Q96RY7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC8□□□□□ -1.13
IFT140Q96RY7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
IFT140Q96RY7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
IFT140Q96RY7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
IFT140Q96RY7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC8□□□□□ -1.13
IFT140Q96RY7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
IFT140Q96RY7 RCC2P2-201ENST00000422174 918 ntBASIC8□□□□□ -1.13
IFT140Q96RY7 COX6CP13-201ENST00000428703 226 ntBASIC8□□□□□ -1.13
IFT140Q96RY7 NDUFA5P1-201ENST00000433858 341 ntBASIC8□□□□□ -1.13
IFT140Q96RY7 RPL7AP61-201ENST00000443410 636 ntBASIC8□□□□□ -1.13
IFT140Q96RY7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC8□□□□□ -1.13
IFT140Q96RY7 AP001804.1-201ENST00000526868 919 ntBASIC8□□□□□ -1.13
IFT140Q96RY7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC8□□□□□ -1.13
IFT140Q96RY7 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.99□□□□□ -1.13
IFT140Q96RY7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
IFT140Q96RY7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
IFT140Q96RY7 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
IFT140Q96RY7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.99□□□□□ -1.13
IFT140Q96RY7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
IFT140Q96RY7 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
IFT140Q96RY7 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
IFT140Q96RY7 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
IFT140Q96RY7 RN7SKP185-201ENST00000362813 326 ntBASIC7.99□□□□□ -1.13
IFT140Q96RY7 SNORA73.1-201ENST00000363107 205 ntBASIC7.99□□□□□ -1.13
IFT140Q96RY7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
IFT140Q96RY7 AMZ2P2-201ENST00000406819 1057 ntBASIC7.99□□□□□ -1.13
IFT140Q96RY7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC7.99□□□□□ -1.13
IFT140Q96RY7 OR13Z1P-201ENST00000416141 834 ntBASIC7.99□□□□□ -1.13
IFT140Q96RY7 RPL7AP25-201ENST00000423357 805 ntBASIC7.99□□□□□ -1.13
IFT140Q96RY7 AL358232.1-201ENST00000448030 501 ntBASIC7.99□□□□□ -1.13
IFT140Q96RY7 AC079168.2-201ENST00000453977 416 ntBASIC7.99□□□□□ -1.13
IFT140Q96RY7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC7.99□□□□□ -1.13
IFT140Q96RY7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC7.99□□□□□ -1.13
IFT140Q96RY7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC7.99□□□□□ -1.13
IFT140Q96RY7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
IFT140Q96RY7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
IFT140Q96RY7 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
IFT140Q96RY7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
IFT140Q96RY7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
IFT140Q96RY7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
IFT140Q96RY7 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
IFT140Q96RY7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
IFT140Q96RY7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
IFT140Q96RY7 MIR659-201ENST00000384963 97 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 ATP5F1P3-201ENST00000397213 657 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 RPL7AP49-201ENST00000429522 581 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 RPS29P17-201ENST00000430795 166 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 AL591438.1-201ENST00000433508 581 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 AC073073.1-201ENST00000493920 463 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 IGLVIV-65-201ENST00000517313 360 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 IGKV2-23-201ENST00000518729 323 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 NDUFB4P11-201ENST00000560510 395 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 AC099676.1-201ENST00000608886 657 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 AC010632.3-201ENST00000611377 369 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 AL133243.1-201ENST00000614487 366 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.98□□□□□ -1.13
IFT140Q96RY7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
IFT140Q96RY7 ZNF137P-201ENST00000456718 1920 ntBASIC7.98□□□□□ -1.13
IFT140Q96RY7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
IFT140Q96RY7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
IFT140Q96RY7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 TLK1P1-201ENST00000456760 2440 ntBASIC7.97□□□□□ -1.13
IFT140Q96RY7 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
IFT140Q96RY7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
IFT140Q96RY7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 RN7SL810P-201ENST00000493031 276 ntBASIC7.97□□□□□ -1.13
IFT140Q96RY7 AP003730.1-201ENST00000524605 285 ntBASIC7.97□□□□□ -1.13
IFT140Q96RY7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
IFT140Q96RY7 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
IFT140Q96RY7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.97□□□□□ -1.13
IFT140Q96RY7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
IFT140Q96RY7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms