Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CSMD1Q96PZ7 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 AC073136.1-201ENST00000449426 2884 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 NHS-204ENST00000615422 8860 ntTSL 5 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 RNA5SP366-201ENST00000365454 123 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 BX323845.1-201ENST00000432417 179 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 AC090017.1-201ENST00000548612 1779 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 BOLA3P4-201ENST00000418151 400 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 UQCRBP1-201ENST00000421129 336 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 COX6CP15-201ENST00000426313 211 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 AC007389.2-201ENST00000434630 306 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 RPL7AP61-201ENST00000443410 636 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 RN7SL189P-201ENST00000468631 289 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 SOD1P3-201ENST00000518682 454 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 AC010424.2-201ENST00000607594 443 ntBASIC4.01□□□□□ -1.77
CSMD1Q96PZ7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 ADAM5-202ENST00000399789 1942 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 SALL4P2-201ENST00000423288 2910 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 AC083899.1-201ENST00000454465 3819 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 SNORA70.10-201ENST00000384515 134 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 MIR491-201ENST00000384877 84 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 SNORD125-201ENST00000459538 96 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 RN7SKP248-201ENST00000516278 305 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 AL356608.1-201ENST00000610034 820 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 AC007068.1-201ENST00000396690 844 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 PDSS1P1-201ENST00000422953 1114 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 BUD31P1-201ENST00000521828 359 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 MIR6133-201ENST00000617057 108 ntBASIC4□□□□□ -1.77
CSMD1Q96PZ7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CSMD1Q96PZ7 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CSMD1Q96PZ7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms