Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC125494.2-201ENST00000602431 657 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AL078623.1-201ENST00000602702 907 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC004805.3-201ENST00000603178 310 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC011453.2-201ENST00000603737 729 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AL157899.1-201ENST00000604110 936 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC019257.2-201ENST00000605539 497 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AF250324.2-201ENST00000608299 610 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC012360.2-201ENST00000609349 391 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC007684.1-201ENST00000609671 477 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 MIR6085-201ENST00000618314 110 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AL356266.1-201ENST00000623311 483 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 SEPT14P19-203ENST00000633205 211 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC099654.12-201ENST00000639868 649 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC106872.5-201ENST00000508856 1416 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AC073544.1-201ENST00000600110 1595 ntBASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
PTCHD1Q96NR3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC007406.5-201ENST00000570140 3170 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 RNU6-1339P-201ENST00000363574 91 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 RNU6-621P-201ENST00000364752 109 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 RNU6-1042P-201ENST00000384204 107 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 MTND4LP20-201ENST00000402379 270 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 PTP4A1P1-201ENST00000420539 515 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 CDY14P-201ENST00000431260 1014 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AL590004.3-202ENST00000445883 451 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 CDY23P-201ENST00000451661 1014 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 DNAJC19P8-201ENST00000452887 259 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 YRDCP3-201ENST00000456507 480 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC110749.1-201ENST00000462007 357 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 RN7SL836P-201ENST00000476140 296 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 PDCL3P4-201ENST00000489621 720 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC022206.1-201ENST00000495947 347 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 DYNLL1P6-201ENST00000503440 264 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC092349.1-201ENST00000504903 310 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC006499.5-201ENST00000505037 514 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC116353.2-201ENST00000505332 712 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 PGBD4P4-201ENST00000509673 613 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AP005205.1-201ENST00000563503 508 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC138207.8-204ENST00000579588 527 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 MIR548S-201ENST00000581352 82 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms