Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC018695.5-201ENST00000605872 315 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC135803.1-201ENST00000608748 565 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC026124.2-201ENST00000621847 656 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AL603750.1-201ENST00000624216 1717 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC007382.1-201ENST00000624376 2618 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 BRAFP1-201ENST00000445336 2703 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 RNU6-666P-201ENST00000363499 107 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 RNU1-77P-201ENST00000390868 162 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 RNU1-149P-201ENST00000390870 161 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 OOSP1-201ENST00000398992 1270 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 HSPE1P16-201ENST00000426640 348 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AL121776.1-201ENST00000429337 372 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 FAM96AP1-201ENST00000430879 482 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC245517.2-201ENST00000442890 346 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 SPRYD7P1-201ENST00000443861 570 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 RPL7P51-201ENST00000490532 749 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AL136038.1-201ENST00000497246 351 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 RPS4XP20-201ENST00000505751 772 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC108120.2-201ENST00000512973 294 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC006349.1-201ENST00000555526 235 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC108359.1-201ENST00000616451 1211 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC090527.3-201ENST00000619041 548 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC005840.5-201ENST00000619166 599 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 LINC00216-201ENST00000623548 1126 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC104820.1-201ENST00000624183 307 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC135068.12-201ENST00000637370 931 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC092079.1-201ENST00000558620 1985 ntBASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM5Q96HC4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 RNA5SP223-201ENST00000365174 120 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 MIR1182-201ENST00000408363 97 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC006455.6-201ENST00000426192 893 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 CYCSP6-201ENST00000434498 302 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 MRPS33P4-201ENST00000434892 317 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 RPS29P10-201ENST00000439197 166 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC114878.1-201ENST00000441166 358 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 CYCSP24-201ENST00000445119 316 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms