Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 HLA-DPA3-207ENST00000454398 229 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 TPRKBP1-201ENST00000456243 481 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC022215.1-201ENST00000481770 362 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 IGBP1P4-201ENST00000503202 879 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC016559.2-201ENST00000510759 359 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC006499.4-201ENST00000510947 694 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 IGLVIV-64-201ENST00000518581 301 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 MRPS16P1-201ENST00000523462 412 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 OR11H3P-201ENST00000554547 982 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AL109741.3-201ENST00000561748 592 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC055764.2-201ENST00000610089 670 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC009318.3-201ENST00000616916 503 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC135068.5-201ENST00000624197 983 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 MIR1910-201ENST00000636955 80 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 ZNF652P1-201ENST00000442420 1309 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTP4A1Q93096 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTP4A1Q93096 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTP4A1Q93096 RNU6-317P-201ENST00000384031 107 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 MTND4P24-201ENST00000424002 397 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 RSL24D1P8-201ENST00000434442 492 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 CBX1P4-201ENST00000439415 457 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 YWHAZP2-201ENST00000440317 728 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC016772.1-201ENST00000444170 1261 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC006326.1-201ENST00000445465 787 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 TPMTP4-201ENST00000450749 678 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AL358876.1-201ENST00000453364 1075 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC087672.1-201ENST00000479876 766 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC025459.1-201ENST00000504072 156 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC098976.1-201ENST00000513014 541 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 IGBP1P1-201ENST00000554337 1009 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 RN7SL290P-201ENST00000578661 300 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AL355816.1-201ENST00000607951 118 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC243654.2-201ENST00000612843 443 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 RN7SL544P-201ENST00000617232 284 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 RN7SL763P-201ENST00000620922 284 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC015726.3-201ENST00000624501 418 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 AC116563.2-201ENST00000624751 535 ntBASIC4.92□□□□□ -1.62
PTP4A1Q93096 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTP4A1Q93096 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTP4A1Q93096 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTP4A1Q93096 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTP4A1Q93096 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTP4A1Q93096 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
PTP4A1Q93096 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PTP4A1Q93096 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PTP4A1Q93096 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.91□□□□□ -1.62
PTP4A1Q93096 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms