Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC126755.2-208ENST00000327792 462 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC138969.1-213ENST00000331436 462 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 RN7SKP104-201ENST00000362605 328 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 RN7SKP113-201ENST00000363891 295 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 CBX1P3-201ENST00000413296 527 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AL158825.1-201ENST00000414735 521 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 HIGD1AP15-201ENST00000416198 280 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 DEFB130D-201ENST00000426866 237 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 DNAJC19P7-201ENST00000428811 344 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 MTCO1P53-201ENST00000441633 699 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 SNORD11.1-201ENST00000459482 85 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC096992.1-201ENST00000459808 709 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 MTCO2P6-201ENST00000463134 685 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC090114.3-201ENST00000479267 829 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 RN7SL591P-201ENST00000496150 292 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC010374.1-201ENST00000503762 1237 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 ASNSP4-201ENST00000511103 447 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 RN7SKP67-201ENST00000515905 235 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 HAUS1P3-201ENST00000523909 662 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AP000916.1-201ENST00000533869 835 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AP001804.2-201ENST00000533932 910 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 PARP1P2-201ENST00000556806 195 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC136624.4-201ENST00000573044 370 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 MIR3189-201ENST00000578735 73 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 MIR4420-201ENST00000583944 77 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 BNIP3P33-201ENST00000598912 569 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC093673.2-201ENST00000609674 331 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 uc_338.26-201ENST00000612659 160 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 Z99129.2-201ENST00000619967 314 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.77□□□□□ -1.33
SMC1BQ8NDV3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 BIN2P1-201ENST00000504996 1530 ntBASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 HSPD1P11-201ENST00000508643 1702 ntBASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 AP003170.5-201ENST00000397185 335 ntBASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 OR51B3P-201ENST00000412287 913 ntBASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 MTCYBP7-201ENST00000419540 1134 ntBASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 AC092634.2-201ENST00000428146 1010 ntBASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 EIF2S2P2-201ENST00000447161 982 ntBASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.76□□□□□ -1.33
SMC1BQ8NDV3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms