Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 RNA5SP242-201ENST00000364171 118 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 RPL7P4-203ENST00000430239 730 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 PPIAP17-201ENST00000438507 471 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC092809.1-201ENST00000441469 474 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AL133477.1-201ENST00000457472 514 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AL122020.1-201ENST00000472287 459 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 GAPDHP39-201ENST00000481866 979 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC116353.3-201ENST00000511215 249 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 RNA5SP116-201ENST00000516132 98 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 WBP1LP3-201ENST00000523033 208 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC087373.1-201ENST00000524920 491 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AP001317.1-201ENST00000531194 960 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC010620.1-201ENST00000601088 1102 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC091193.1-201ENST00000604640 448 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AL158042.1-201ENST00000605338 460 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AL136131.3-201ENST00000607600 188 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AL451064.1-201ENST00000607718 471 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AL008723.3-201ENST00000608926 449 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC121761.2-201ENST00000617300 689 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC067852.7-201ENST00000623270 535 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AC016717.3-201ENST00000624730 554 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 AL049767.1-202ENST00000637826 242 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 OR13C1P-202ENST00000641378 2919 ntBASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
SYNPOQ8N3V7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 Z99496.1-201ENST00000469424 1477 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC011416.1-201ENST00000514947 1732 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 SGO1P1-201ENST00000603525 1447 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 HMGB1P5-201ENST00000255320 642 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 SNORD113-6-201ENST00000363345 75 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 SKINT1L-201ENST00000401057 817 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 MTND4P22-201ENST00000413116 1169 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC007435.1-201ENST00000421086 415 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 TNPO1P1-201ENST00000423641 1138 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 FTLP19-201ENST00000433300 394 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 GAPDHP48-201ENST00000436626 961 ntBASIC6.28□□□□□ -1.4
SYNPOQ8N3V7 NDUFS5P5-201ENST00000437256 321 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms