Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC65Q8IXS2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 LRRC37BP1-201ENST00000398851 714 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 OR7E125P-201ENST00000443450 846 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 NDUFA5P8-201ENST00000449019 346 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 TCEA1P1-201ENST00000449716 880 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 IGHV5-78-201ENST00000450948 295 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AL691482.1-201ENST00000453255 87 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 RPL21P6-201ENST00000479171 504 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 NPM1P29-201ENST00000483112 803 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 RN7SL244P-201ENST00000493405 297 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AC011411.1-201ENST00000509592 876 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 COX6B1P5-201ENST00000509843 249 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 OR7E128P-201ENST00000532736 1024 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AC092490.3-201ENST00000545370 572 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AGGF1P9-201ENST00000561884 913 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AC016252.1-201ENST00000609721 474 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 AC100778.3-201ENST00000580060 1750 ntBASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC65Q8IXS2 NAMPTP1-201ENST00000440465 2514 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC083843.3-201ENST00000623679 2186 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 THAP12P8-201ENST00000447914 2115 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 SNORA70.10-201ENST00000384515 134 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 MIR137-201ENST00000385223 102 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC013442.1-201ENST00000397347 228 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 GTF3AP1-201ENST00000416942 1004 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 RPL7L1P1-201ENST00000448259 785 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 HAUS8P1-201ENST00000549005 542 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AL121612.2-201ENST00000612261 482 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC073869.10-201ENST00000642016 354 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 RBPJP2-201ENST00000618187 1444 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 AC093775.1-201ENST00000624154 1868 ntBASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC65Q8IXS2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AL606537.1-201ENST00000607258 2011 ntBASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC65Q8IXS2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms