Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 U3.3-201ENST00000362986 216 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 RNU1-43P-201ENST00000365052 165 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 BMS1P3-201ENST00000372011 932 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 MIR600-201ENST00000385007 98 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 RN7SKP229-201ENST00000410465 302 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 RAB9AP5-201ENST00000437794 597 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 RPS29P10-201ENST00000439197 166 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 RAB9AP2-201ENST00000443911 597 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 Z92846.1-201ENST00000456203 268 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 RN7SL515P-201ENST00000463999 297 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 MTND3P6-201ENST00000485242 339 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 AC011411.1-201ENST00000509592 876 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SKA3Q8IX90 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 MIR1269B-201ENST00000580405 75 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 RN7SL753P-201ENST00000581238 290 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 AC233280.2-201ENST00000603917 1070 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 AC117490.2-201ENST00000610042 594 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SKA3Q8IX90 AC090527.3-201ENST00000619041 548 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 AP002505.2-201ENST00000623585 696 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SKA3Q8IX90 AC100778.3-201ENST00000580060 1750 ntBASIC4.58□□□□□ -1.68
SKA3Q8IX90 AP001273.1-201ENST00000624493 3152 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 AL034549.2-201ENST00000618285 3373 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC235565.1-201ENST00000456962 1325 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AL450345.1-202ENST00000605741 3881 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 RNU6-1331P-201ENST00000363658 106 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 RNU1-74P-201ENST00000384108 171 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 VN1R31P-201ENST00000417498 730 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 RPS4XP16-201ENST00000427198 791 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 ARAFP2-201ENST00000440565 559 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC245047.2-201ENST00000441060 530 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AL589765.3-201ENST00000446084 462 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 AL645937.3-201ENST00000453647 936 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 RPS6P2-201ENST00000454208 705 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 RPS26P39-201ENST00000469206 341 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 COPS8P2-201ENST00000473228 627 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 GTF2F2P1-201ENST00000511083 675 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 EIF3KP3-201ENST00000514461 639 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 RN7SKP46-201ENST00000515942 234 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 RNA5SP464-201ENST00000516251 108 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC027369.5-201ENST00000533838 755 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC134349.2-201ENST00000535136 910 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC004825.1-201ENST00000555068 586 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 MTCYBP13-201ENST00000578634 1093 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 GMCL1P2-201ENST00000605230 823 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 OR7M1P-201ENST00000608946 533 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 AC135068.12-201ENST00000637370 931 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SKA3Q8IX90 SCN1A-220ENST00000641603 12506 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SKA3Q8IX90 MAPK10-349ENST00000641767 3661 ntBASIC4.57□□□□□ -1.68
SKA3Q8IX90 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms