Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 HSPD1P9-201ENST00000420325 1636 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 DDX18P6-201ENST00000450119 1997 ntBASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
TRIM48Q8IWZ4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM48Q8IWZ4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
TRIM48Q8IWZ4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.09□□□□□ -1.44
TRIM48Q8IWZ4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM48Q8IWZ4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 BRAFP1-201ENST00000445336 2703 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 COX6B1P3-201ENST00000312310 260 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 IL6STP1-201ENST00000346911 1020 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 RNA5SP105-201ENST00000391123 113 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC093719.1-202ENST00000392735 373 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 RNA5SP156-201ENST00000410250 110 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 Y_RNA.604-201ENST00000410574 102 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 OR5AW1P-201ENST00000426334 1006 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC234064.1-201ENST00000436312 247 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL590004.3-202ENST00000445883 451 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 RPS27AP2-201ENST00000457576 465 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC091959.2-201ENST00000477363 321 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC010460.1-201ENST00000507087 466 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC005178.1-201ENST00000508392 440 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC008885.2-201ENST00000509506 930 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC090958.1-201ENST00000511122 351 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC073916.1-201ENST00000545095 130 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC079171.1-201ENST00000568788 914 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 MIR3611-201ENST00000584484 83 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 GLYATL1P2-202ENST00000588046 902 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 DYNLL1P1-201ENST00000595442 269 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC006270.3-201ENST00000605967 1036 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL159169.2-201ENST00000610061 1269 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC024255.1-201ENST00000614376 102 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 MIR4278-201ENST00000636094 69 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 MFSD8-245ENST00000641743 948 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC093297.3-201ENST00000607056 2517 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 CASC19-281ENST00000642118 1554 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 PSG10P-201ENST00000501199 1500 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AL355852.1-201ENST00000454081 1771 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 AC093225.1-201ENST00000506867 1408 ntBASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM48Q8IWZ4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 EIF3EP1-201ENST00000433978 1316 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms