Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC009120.1-201ENST00000493458 473 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC093815.1-201ENST00000508637 280 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC116353.3-201ENST00000511215 249 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC074087.1-201ENST00000512059 724 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 RN7SKP5-201ENST00000517045 272 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 CYB5AP5-201ENST00000549779 389 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC008015.1-201ENST00000555505 465 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 ZNF322P1-201ENST00000568013 1209 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC010546.1-201ENST00000569391 485 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC015802.2-201ENST00000589690 189 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VRK3Q8IV63 AL513327.3-201ENST00000602618 469 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 RBM11P1-201ENST00000604951 799 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 TUSC7.1-201ENST00000610969 165 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 AL450489.1-201ENST00000612071 468 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 MIR6778-201ENST00000617912 73 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 AC073530.2-201ENST00000623987 261 ntBASIC5.65□□□□□ -1.5
VRK3Q8IV63 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.65□□□□□ -1.51
VRK3Q8IV63 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VRK3Q8IV63 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VRK3Q8IV63 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
VRK3Q8IV63 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.65□□□□□ -1.51
VRK3Q8IV63 AL449283.1-201ENST00000602631 3403 ntBASIC5.65□□□□□ -1.51
VRK3Q8IV63 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VRK3Q8IV63 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
VRK3Q8IV63 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VRK3Q8IV63 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VRK3Q8IV63 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AL592429.1-201ENST00000403909 1473 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 Y_RNA.77-201ENST00000362962 107 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 RPS3AP26-201ENST00000398259 784 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 AL136310.1-201ENST00000404926 654 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 SNORA11.5-201ENST00000408163 128 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AF274854.1-201ENST00000413236 615 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 RPS3P2-201ENST00000421346 701 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 MTND4LP11-201ENST00000422184 280 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 AKR1B10P1-201ENST00000425765 942 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC127526.2-201ENST00000426436 775 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 AL590399.2-201ENST00000427536 309 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 KRT8P51-201ENST00000438938 274 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 MTND4P18-201ENST00000447010 465 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 RPL31P20-201ENST00000449593 360 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 MRPL35P4-201ENST00000453682 566 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC094085.1-201ENST00000468914 584 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 RPS17P15-201ENST00000475609 349 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 RPL21P47-201ENST00000483696 477 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 DUTP1-201ENST00000493631 470 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC105420.1-201ENST00000504389 582 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 SCARNA6.1-201ENST00000516989 238 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 RNU6-1028P-201ENST00000517164 93 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 NPM1P52-201ENST00000518264 846 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 MTND4LP18-201ENST00000526864 291 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 AP000916.1-201ENST00000533869 835 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AL359715.3-201ENST00000569267 2123 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.64□□□□□ -1.51
VRK3Q8IV63 VN1R81P-201ENST00000602085 372 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC022400.9-201ENST00000623633 273 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
VRK3Q8IV63 AC117409.1-201ENST00000470499 1310 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 KYNUP3-201ENST00000574386 1341 ntBASIC5.64□□□□□ -1.51
VRK3Q8IV63 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms